Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3990 |
Symbol | |
ID | 5089943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4773309 |
End bp | 4774793 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743411 |
Product | aminotransferase, class V |
Protein accession | YP_001196319 |
Protein GI | 146301728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.941199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGG AAATGAATGC TATTGAGCCA ACAACAAAAC CAACAGAGTC TGAATGTTAC TTTTCTAAGT TTAGAGAAAA TACAGTAGGA ATTGATCATA CTTTCGAATC GGTTTACGGA GAGCAAAATC TGATATATGC TGACTGGGTT GCCAGTGGAA GGCTGTATAT CCCGATCGAA GATATAATGC TCAATAAAAT CGGCCCAATG ATTGCCAATA CGCATTCACT TTCAAGTCAA ACAGGAAAAA CGTCCACGTA TGCGTATCAG TATGCAAGAG ATATTATTAA AAAATCGGTT AACGCTAATG AATCAGATGT TTTGATAACA ACCGGAAGCG GTATGACAGC AGCTTTATCG AAACTGCAGC GTATTATGGC TCTGAGAACA AAATCAGATC AGGATAGACC TGTCGTTTTT ATCACACACA TGGAACATCA CTCCAATCAG GTTTCGTGGT ATGAAACCAA TGCCGAAGTT GTGATTTTAC CGCCTGATGA AAATAATTTA GTTGATCCGA AGGTACTTTC TCAGGAAATC AAAAAATATG CAGACAGAAG CTTAAAAATA GGTTCATTTA CGGCCTGTTC GAATGTTACG GGAATTATTA CGCCTTATCA TGAATTAGCC AAAATTATGC ACCAAAACGG GGGACTTTGT TTTGTAGATT TTGCAGCTTC GGCACCGTAT GTCAAAATCG ATATGCATCC AAAAGATCCA GAACAGCAAT TGGATGCAAT TTTCTTTTCG CCTCATAAAT TTTTGGGCGG ACCCGGAACC TGCGGTATTT TAGTTTTTAA TGAAAAATTA TACCAATCTG ATTTTCCAGA TAATCCGGGC GGGGGAAATG TAAAATGGAC CAATCCGTTA GGAAAATATT GTTACAGCGA TGTAATAGAA GTGAGGGAAG ATGGCGGGAC TCCGGGGTTT CTGCAGGTTA TTAGAACTGC TTTGTCTTTA GAATTAAAAG AACAAATGGG AGTTGAGAAA ATCAAAAAGA GAGAAAAAGA ACTGCTTGAC CTTTGTTTTT CGAGACTTCA AAAAATACAA GGATTATCCA TTTTAGGCGA TTTAACCACA GAAAGAATTG GCTGTGTTTC TTTTGTAATC GAAGATATTC ATTACAATTT AATTGTTAGG CTTTTAAATG ACCGTTTTGG AATTCAGGTT CGCGGCGGCT GGTCTTGTGC AAGTACTTAT GCGCATTATT TGTTTAACAT CAACGAAAAA AGATCGGCTG AAATTACAAA TGAATTGTTA CAGCGAAATC AATCCAATAA ACCGGGCTGG GTGCGTTTAT CACTGCATCC GATTATGACA AATGAAGCGC TTTTTTATAT CTGCGATGCA ATCGAGAAAA TAGCTTCGAA TTATAAAAAA TGGAAGAAGG ATTATGAATA TAATCCGGTT TCAAATGAAT TTGAAAACCC TGAAATAAAA GAAAATATAG CAGAAGAAGT AAATGAATGG TTTAAGTTAG TTTAA
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Protein sequence | MIKEMNAIEP TTKPTESECY FSKFRENTVG IDHTFESVYG EQNLIYADWV ASGRLYIPIE DIMLNKIGPM IANTHSLSSQ TGKTSTYAYQ YARDIIKKSV NANESDVLIT TGSGMTAALS KLQRIMALRT KSDQDRPVVF ITHMEHHSNQ VSWYETNAEV VILPPDENNL VDPKVLSQEI KKYADRSLKI GSFTACSNVT GIITPYHELA KIMHQNGGLC FVDFAASAPY VKIDMHPKDP EQQLDAIFFS PHKFLGGPGT CGILVFNEKL YQSDFPDNPG GGNVKWTNPL GKYCYSDVIE VREDGGTPGF LQVIRTALSL ELKEQMGVEK IKKREKELLD LCFSRLQKIQ GLSILGDLTT ERIGCVSFVI EDIHYNLIVR LLNDRFGIQV RGGWSCASTY AHYLFNINEK RSAEITNELL QRNQSNKPGW VRLSLHPIMT NEALFYICDA IEKIASNYKK WKKDYEYNPV SNEFENPEIK ENIAEEVNEW FKLV
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