Gene Fjoh_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3990 
Symbol 
ID5089943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4773309 
End bp4774793 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content37% 
IMG OID644743411 
Productaminotransferase, class V 
Protein accessionYP_001196319 
Protein GI146301728 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.941199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGG AAATGAATGC TATTGAGCCA ACAACAAAAC CAACAGAGTC TGAATGTTAC 
TTTTCTAAGT TTAGAGAAAA TACAGTAGGA ATTGATCATA CTTTCGAATC GGTTTACGGA
GAGCAAAATC TGATATATGC TGACTGGGTT GCCAGTGGAA GGCTGTATAT CCCGATCGAA
GATATAATGC TCAATAAAAT CGGCCCAATG ATTGCCAATA CGCATTCACT TTCAAGTCAA
ACAGGAAAAA CGTCCACGTA TGCGTATCAG TATGCAAGAG ATATTATTAA AAAATCGGTT
AACGCTAATG AATCAGATGT TTTGATAACA ACCGGAAGCG GTATGACAGC AGCTTTATCG
AAACTGCAGC GTATTATGGC TCTGAGAACA AAATCAGATC AGGATAGACC TGTCGTTTTT
ATCACACACA TGGAACATCA CTCCAATCAG GTTTCGTGGT ATGAAACCAA TGCCGAAGTT
GTGATTTTAC CGCCTGATGA AAATAATTTA GTTGATCCGA AGGTACTTTC TCAGGAAATC
AAAAAATATG CAGACAGAAG CTTAAAAATA GGTTCATTTA CGGCCTGTTC GAATGTTACG
GGAATTATTA CGCCTTATCA TGAATTAGCC AAAATTATGC ACCAAAACGG GGGACTTTGT
TTTGTAGATT TTGCAGCTTC GGCACCGTAT GTCAAAATCG ATATGCATCC AAAAGATCCA
GAACAGCAAT TGGATGCAAT TTTCTTTTCG CCTCATAAAT TTTTGGGCGG ACCCGGAACC
TGCGGTATTT TAGTTTTTAA TGAAAAATTA TACCAATCTG ATTTTCCAGA TAATCCGGGC
GGGGGAAATG TAAAATGGAC CAATCCGTTA GGAAAATATT GTTACAGCGA TGTAATAGAA
GTGAGGGAAG ATGGCGGGAC TCCGGGGTTT CTGCAGGTTA TTAGAACTGC TTTGTCTTTA
GAATTAAAAG AACAAATGGG AGTTGAGAAA ATCAAAAAGA GAGAAAAAGA ACTGCTTGAC
CTTTGTTTTT CGAGACTTCA AAAAATACAA GGATTATCCA TTTTAGGCGA TTTAACCACA
GAAAGAATTG GCTGTGTTTC TTTTGTAATC GAAGATATTC ATTACAATTT AATTGTTAGG
CTTTTAAATG ACCGTTTTGG AATTCAGGTT CGCGGCGGCT GGTCTTGTGC AAGTACTTAT
GCGCATTATT TGTTTAACAT CAACGAAAAA AGATCGGCTG AAATTACAAA TGAATTGTTA
CAGCGAAATC AATCCAATAA ACCGGGCTGG GTGCGTTTAT CACTGCATCC GATTATGACA
AATGAAGCGC TTTTTTATAT CTGCGATGCA ATCGAGAAAA TAGCTTCGAA TTATAAAAAA
TGGAAGAAGG ATTATGAATA TAATCCGGTT TCAAATGAAT TTGAAAACCC TGAAATAAAA
GAAAATATAG CAGAAGAAGT AAATGAATGG TTTAAGTTAG TTTAA
 
Protein sequence
MIKEMNAIEP TTKPTESECY FSKFRENTVG IDHTFESVYG EQNLIYADWV ASGRLYIPIE 
DIMLNKIGPM IANTHSLSSQ TGKTSTYAYQ YARDIIKKSV NANESDVLIT TGSGMTAALS
KLQRIMALRT KSDQDRPVVF ITHMEHHSNQ VSWYETNAEV VILPPDENNL VDPKVLSQEI
KKYADRSLKI GSFTACSNVT GIITPYHELA KIMHQNGGLC FVDFAASAPY VKIDMHPKDP
EQQLDAIFFS PHKFLGGPGT CGILVFNEKL YQSDFPDNPG GGNVKWTNPL GKYCYSDVIE
VREDGGTPGF LQVIRTALSL ELKEQMGVEK IKKREKELLD LCFSRLQKIQ GLSILGDLTT
ERIGCVSFVI EDIHYNLIVR LLNDRFGIQV RGGWSCASTY AHYLFNINEK RSAEITNELL
QRNQSNKPGW VRLSLHPIMT NEALFYICDA IEKIASNYKK WKKDYEYNPV SNEFENPEIK
ENIAEEVNEW FKLV