Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3739 |
Symbol | |
ID | 5089773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4436778 |
End bp | 4437734 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644743163 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001196071 |
Protein GI | 146301480 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.975676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC ATATAAAGGA AGAATTCGGT TTCTTAGCGG GTTTTGCCGA TTTATTAGGC ACAGAAGTAA ACAATGGAAT ATTAGTGATA CCCGATAATA AAGGGAAAGG CTATTTAAGA GGATTTAGAT TAGACAATTC CATAAATATG CTTGTAAGTT TTTATGAGTT TAATGACAAT GTGCTTGCGA AAAGACTAGG AGGTCAAAAT ACACTGAATC GAATACTATT TTCTTTCAAT ACTATTTTTC CTGATGCTGA TTCAAAAAAC AAATATTCAG GAAATCTTCC TTCAATTCAA ATTTTTAAGG GAAAACTTAA TATTGAAACA TTCTATCCGG GCAGAACTAA ATTCAATTCT ATTTTCATTG GAATTGATTC CGATAAATTA GCCAAAACTC TAGGAGTGAA TATTCACAAT GAAATTTTCA GAAATATTAT TACCAGCGAA CAGCCGATTT TATTTGAAGA GCTGCTTTCG CCAAAAATTC AGCAGGTGGC CATGGAAATT ATTCAGACTG ACGTTCCGGA TTCCCTGACT GATTTCTTTT TTAAAATCAA AGCCGAAGAA TTAATATGCC TGACTCTAAA AGAGCTTTTT AAAAGAGAAA ATCCAACTAC ACACGCACTA AATCAAATTG ATGTTCAAAA AATTTATAAG GTGAGAGATC TAATTTTGAA TAACATTGCT GTGGCTCCAG TTATAAAACA CCTGGCTTCA GAAGTAGGGA TGAGCGAATC AAAGTTTAAA AGATTATTTA AACAAATTTT TGGCGACAGT TTGTTTAGCT ATTACCAAAA GTTCAGAATG AAGGAAGCTT CACGATTGCT AAAAGAAAAT AAAATGACTG TTTCAGAGGT TGGCTTTAAG ATGGGTTTTT CTAATTTAAG TCATTTTGCC AAAGCTTTTG AACAACATAT TGGAATAAAG CCAAAATCAT TCCAAAAACT AAAATAG
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Protein sequence | MKLHIKEEFG FLAGFADLLG TEVNNGILVI PDNKGKGYLR GFRLDNSINM LVSFYEFNDN VLAKRLGGQN TLNRILFSFN TIFPDADSKN KYSGNLPSIQ IFKGKLNIET FYPGRTKFNS IFIGIDSDKL AKTLGVNIHN EIFRNIITSE QPILFEELLS PKIQQVAMEI IQTDVPDSLT DFFFKIKAEE LICLTLKELF KRENPTTHAL NQIDVQKIYK VRDLILNNIA VAPVIKHLAS EVGMSESKFK RLFKQIFGDS LFSYYQKFRM KEASRLLKEN KMTVSEVGFK MGFSNLSHFA KAFEQHIGIK PKSFQKLK
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