| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3682 |
|---|
| Symbol | |
|---|
| ID | 5092844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4373638 |
|---|
| End bp | 4374504 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644743107 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001196015 |
|---|
| Protein GI | 146301424 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0338983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AATTTATCAC TTGGGATGAT TTTGTAAAAG GATTTGGTAA AGAGATGGTT
TCCGCTGAAG ACGTATTTAA AAATATGTCT GACAGTGGAT TGAAAGACAA TTGTCTAACT
AAAATGGATT TTACTTTTAT TTCTGACGAT AAGGAAAATC TAATCCGATT ATCTGAATTC
TTAAGTTCCC ATTATCCATA TGTATTGCAT GAAGTTAAAA AATACGGATC ACTTTGGGAA
GTAAACGGAG AAACAAATGA AATACCAATG ACTGCAGAAA ATTTAATGTA TTGGAGTTTG
GATATGTACA AAAGAGGATA TGAATTTGAT TCAACTCTTG ATGCTTATGG AGGATTATTT
GATCCGCGAA GCCCAAATTT TCCAGACTTG GCCAATTCGA AAGCGGAGTA CTATTTTGAT
AAAGGTATTG ACTGTTATAA CAATGGAGAT TTAAGTGGCT CAATATTTAA TTGGTCATTG
GCAATTGCAA TTGATTCGAA AGATTCAAAT GCTTATTATT CAAGAGCAAT TGTAAAGAAT
GAACTTTACA CTTGGAAATC TGCTCTTAAA GATTATGACA AAGCTATAGA GATTGCTCCA
AAATTTGGAA GTGCTTTAAT AAATAGATGC GGATTAAAAG ATGAAAACGG AGACTATCAA
GGTGCGATTG CAGATTATGA AAAAGTACTG CAGTTTGATG ATTCATCACT TGAAAATAAG
CAGCAGGCAT ATTTTAATCT TGGAAATACA AAACTTAATT TAAACGATAA AAGAGCAGCT
TGTGAAAATT GGAATAGAGC ATTAGAACTT GGTGCCGATT ATGCTAAAGA TAAAATTGAT
GAATACTGTA AAGGAAAAAA GAAATGA
|
|---|
| Protein sequence | MENKFITWDD FVKGFGKEMV SAEDVFKNMS DSGLKDNCLT KMDFTFISDD KENLIRLSEF
LSSHYPYVLH EVKKYGSLWE VNGETNEIPM TAENLMYWSL DMYKRGYEFD STLDAYGGLF
DPRSPNFPDL ANSKAEYYFD KGIDCYNNGD LSGSIFNWSL AIAIDSKDSN AYYSRAIVKN
ELYTWKSALK DYDKAIEIAP KFGSALINRC GLKDENGDYQ GAIADYEKVL QFDDSSLENK
QQAYFNLGNT KLNLNDKRAA CENWNRALEL GADYAKDKID EYCKGKKK
|
|---|
| |