Gene Fjoh_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3568 
Symbol 
ID5093450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4259064 
End bp4260245 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content48% 
IMG OID644742993 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001195901 
Protein GI146301310 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGGG CAATTGTACA CATTGACATG AACACGTTTT TCGTTTCCTG CGAAAGACTA 
ACCAATTCTG AACTTAACGG GATTCCTCTG ATTATCGGCG GAGGAGAAAG GGGCGTGGTG
GCTTCGTGTT CCTACGAGGC CAGAAAATTC GGCGTGCGGT CCGCCATGCC CATTCACATG
GCCATGAAAT TGTGCCCGCA GGCCAAAATA ATGAAAGGCG ACATGGAACT TTATTCCAGG
CTCTCCCACG ACATTACCGA GATAATCCAG GAAAAAGCGC CCGTGGTAGA AAAGGCAAGT
ATTGACGAGT TTTATCTCGA CATCACCGGA ATGGACAAAT TTTACGGCAG CTACAAATGG
ACCGATGAGC TGGCGCAGCG CATCACAAAA GAAACAGGCC TACCCCTCAC CTTTGCACTT
TCAATAAACA AGACGGTATC CAAAATAGGA ACAGGTGAAG GAAAGCAGAA ACAGAATCTT
GAAATTCCCG AACATCTGGT GCAGTCTTTT TTAAATCCGC TCTCGATTAG AAAAATCCCT
ATGGTCGGCC AGAAAACCTT TGAGCTTCTT TCCCGCATCG GCATCCGCAC CATCCAGACA
CTGTCTGAAA TGCCAGCCGA ATCACTCCAG CAGATGATCG GCAAAAACGG CACGGAACTC
TGGAAAAAAG CCAATGGAAT TGACAACAAT CCTGTAGAGC CCTACACGGA AAGAAAATCA
ATTTCAACCG AACATACCTT CTCACAGGAC ACCATTGATG TATTGAAGCT GAACAGGATC
CTTCAGGGCA TGGTGGAGAA ACTGGCCTAT CAGCTCCGCG AGGAAGAGTG GCTCACCTCA
ACGGTGACCG TCAAAATAAG GTACGCCAAT TTTGATACCG AAACCAAGCA GTCCCGTGTG
CCTTACACCT CAGCGGATCA TATTCTGACC CAGACCGTGA CGGATCTCTT TGCCAAACTC
TACCAGCGCC GCATGAGACT GCGCCTTATC GGTGTGCGAT TCAGCGGCCT TGTCAGGGGA
ACCTATCAAA TCGACCTGTT CAATGACACC GAAGAAATGC TCGCGCTCTA TCAGGCCATG
GACAGGATGA AGACCCGTTA CGGATTTGAT GCCGTGATGC GATGCGCCGG CGCATCTTTC
AAACCCAATA ATAAAGACGA AATTTTAAAA CGCAAAAAAT AA
 
Protein sequence
MTRAIVHIDM NTFFVSCERL TNSELNGIPL IIGGGERGVV ASCSYEARKF GVRSAMPIHM 
AMKLCPQAKI MKGDMELYSR LSHDITEIIQ EKAPVVEKAS IDEFYLDITG MDKFYGSYKW
TDELAQRITK ETGLPLTFAL SINKTVSKIG TGEGKQKQNL EIPEHLVQSF LNPLSIRKIP
MVGQKTFELL SRIGIRTIQT LSEMPAESLQ QMIGKNGTEL WKKANGIDNN PVEPYTERKS
ISTEHTFSQD TIDVLKLNRI LQGMVEKLAY QLREEEWLTS TVTVKIRYAN FDTETKQSRV
PYTSADHILT QTVTDLFAKL YQRRMRLRLI GVRFSGLVRG TYQIDLFNDT EEMLALYQAM
DRMKTRYGFD AVMRCAGASF KPNNKDEILK RKK