Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3476 |
Symbol | |
ID | 5089677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4142821 |
End bp | 4144758 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644742901 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001195809 |
Protein GI | 146301218 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.41488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TATATATCCT GAGTTTAGTC TTGAGCATTA CGTTTAGTTT TGCTCAAAAG ACTAATTTAA AACAAGCCGA TGCATTGTTT AGAAATTATT CATATGCCGA TGCTTCAAAA GCCTATGAAG AAATTTTGCA GAACATCAAA AATCCTACGG CTCAAACTTT AAAAAATGCA GCCGATTCGT ATTACTTTAT TTCAGATGCA CGAAATGCAC TTAAATGGTA TAAAAAACTA TACGAAGTTC AGGGAAATAA TTTAACCGAT ATTTACTATC TGCGTTATAT TCAATCTATG AAAGCAGTTA TGGATTATGA TGAAGCAGAT AGAGTTACAA AAGAATATCT CGATAAAAAA GGTGATAAAA AAGAAATCAG CCGTTATGTT GCCCAAAAGA AACAACTGGA CAGTTTAGCA AAAGCAAAGT CGCTTTATCA GATTAAAAAC CTGGATATTA ATACCAGTAA ATCTGATTTT GGAGCAACAT TTTTTGGAGA TAAAATCGTT TTTACATCAG CAAGAGATAC TACCAAATTT AGTGAAAAAC TCTATACATG GAACAATCAG CCTTTTTTGA ATTTATATGT TTCAGAAAGA AATCCGGCCG ATGGAAGTTT GTTTAACGAA AAACTTTTTC TTCCAAATGT CATGAGCAAA TATCACGAAG CTACGGCAAG TTTCGATCCA AGCGGAAAAA CCATTTATTA TTCGACAAAC ATTGTAAAGA AAAATAAATT GGTAGTCGAT GGAGATAAAG TCAACAATTT TCAAATTGTA AAAGGCACAA TTGTGGATAA TAAACTAGAA AATCCTCAAA ATGTTTTCTT TGACAATGAC GATTATTCAG TTGGACATCC TTGTTTAAGC GAAGACGGAC AATGGCTTTT CTTTGCATCA GATATGCCGG GAGGTTTTGG TGAAACCGAT TTGTATGTGG TAAAAATTGC TGCTGACGGA ACAATGAGTT CTCCATTAAA TTTAGGACCA AATATCAATA CAATGGGAAA TGAGGTTTTT CCTTATTACA GAAATGGAAT GCTTTATTTT TCTTCAGACG GACATTATGG TTTAGGTGAT TTAGATGTTT ACGAAAGCAA ATTTTTAGCC GATGGAAATT TTACAACACC TAGAAATCTT GGAGCACCAA TAAACAGTAA CAAAGACGAT TTTACTTATG TTGTTGATAA AGCAGATACT TATGGTTATG TTTCATCAAA TAGAGCAGGA GGAAAAGGAG ATGATGATAT TTATTCATTT GTAAAAGGTA AACCCGTTTG CAACCAAAGT ATTTCAGGGA TTGCAGTTGA CAGAAAAACG AAACTTCCGT TAACAGATGT TACCATTATG GCTTACAACT CGTTTAAAGA AGTACTTGGA GAAACAAAAA CCAATTACGA AGGAAAGTAT GCAATTGTTG TTCCATGTAA TAAAGTTGTA AATATGATTG CAGCAAAGCC AAATTATAGC AGCGACGAAA AAACTGTAGA AACGACAAAA GAAAACGAAG GCGAAATAAA AGATGTCAAC TTCGAGCTAA GCAACTACGA CGATTTGGTA GTTAAAAAGA GAGGTGTAGA AATGGTAGAT GTTCAGCCTA TTTATTTTGA TTACGACAAA TACGATATAA CGCCAAAAGC TATTGAAGAA TTAACCAAAG TCGTTTTTAT CATGCAGAAA TTTCCAAACA TTAAAATTAA AATAGAATCA CATACAGATT CTCGAGGAAA AGATTCCTAT AACTTAAAAC TTTCAGACAA CAGAGCCAAG TCAACAAGAG ATTATATTCT CTCACAAGGC ATTGATGCTT CAAGAATTGA AAGTGCCATT GGTTACGGTG AAAGCCGATT AATCAATAAA TGTAAAAACG GAGTGAAATG TACTGAAGAA GAACATTTAT TAAACAGACG CTCTGACTTT ATCATTATTC AAAAATAG
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Protein sequence | MKKLYILSLV LSITFSFAQK TNLKQADALF RNYSYADASK AYEEILQNIK NPTAQTLKNA ADSYYFISDA RNALKWYKKL YEVQGNNLTD IYYLRYIQSM KAVMDYDEAD RVTKEYLDKK GDKKEISRYV AQKKQLDSLA KAKSLYQIKN LDINTSKSDF GATFFGDKIV FTSARDTTKF SEKLYTWNNQ PFLNLYVSER NPADGSLFNE KLFLPNVMSK YHEATASFDP SGKTIYYSTN IVKKNKLVVD GDKVNNFQIV KGTIVDNKLE NPQNVFFDND DYSVGHPCLS EDGQWLFFAS DMPGGFGETD LYVVKIAADG TMSSPLNLGP NINTMGNEVF PYYRNGMLYF SSDGHYGLGD LDVYESKFLA DGNFTTPRNL GAPINSNKDD FTYVVDKADT YGYVSSNRAG GKGDDDIYSF VKGKPVCNQS ISGIAVDRKT KLPLTDVTIM AYNSFKEVLG ETKTNYEGKY AIVVPCNKVV NMIAAKPNYS SDEKTVETTK ENEGEIKDVN FELSNYDDLV VKKRGVEMVD VQPIYFDYDK YDITPKAIEE LTKVVFIMQK FPNIKIKIES HTDSRGKDSY NLKLSDNRAK STRDYILSQG IDASRIESAI GYGESRLINK CKNGVKCTEE EHLLNRRSDF IIIQK
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