Gene Fjoh_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3461 
Symbol 
ID5089662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4126897 
End bp4128483 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content30% 
IMG OID644742886 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001195794 
Protein GI146301203 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0023015 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TATTTTTTAG AATACTTGTT TTATTGATGA GTTTGTCCTT AATAGGGATA 
ATTCTGGTAC AGGTATTTTG GTTCAATTCT TCATTTAAAA ATAATGAAGA ACAGTTTAAA
TACCACGTTA CACAAGTAAT TGGAAATGTT GCAGATAAAC TTGAGCAGCA AGAAGAATAC
AGTTTTTACG ACAAATACAA CCGTATAAAA GACAGTACCG GTAAAATTCC ACAAAAGGAA
GACTTACTTG AAGTATTGTA TGTACAAAGA AACACAAAAA CAAATAAAAC AATTGTTTAT
TCTAATACTC TAAGCTCTGA AGATTACGAT ATAGACGGAT CTCTTTTTAA TAAAAGATTC
AGCAGCGAAA GATTTAAAAA TTTCAGCTCT AAAAGAGTAA CAGAAGTTTA TAATAATAAC
AACGGAATTG ATAATAATAG TTTAGGTCAA AGTATTATTC CGGATCTTAA AATTGAAAAA
TCCGGAAGTT TAGATATTTT AAATAAAGTT CAGCAGCAGA TTCAGTATAA AGACATTGCT
TCATTAACCC CCATTGAAGG TCGAATTACA AAAGATAAAC TGCATAAACT ATTAAAAAAG
GAATTAGAAG AATACGGTGT TAAAACCAAA TTCGAATACG GAATTTACAG CAGCGGTGTT
CCAACCAAAA TTAAATCGGA TGGATTTCAC TATGACAAAG AAGCAACATA TAATATTCCG
ATATATACTG ATAACGAAGG GAACAGCCGA TATGAATTAT CAGTTACCTT CCCAAATAAA
AAGAAATTTT TATTATCTGA GTTATTAAGT ATTACTATTT TATCGATAGT ATTTACATTA
ATTATAATAG TTGCTTACAC AAGTGCATTA AATCAATTAC TGCGTCAAAA ACATATTTCT
GAAATCAAAA CAGATTTTAT TAATAATATG ACGCACGAGT TTAAAACACC AATTGCAACG
ATTAACTTAG CTCTAGATGC TATCAGGAGT CCTAAAGTAA TTGAAGATAA AGAAAAAGTC
TATCGATATC TTCAAATGAT AAGGGATGAA AATAAAAGAA TGCATGCCCA GGTTGAAAAT
GTACTCCGTA TTTCTAAATT AGAAAAAAGA GAACTTGATA TTACAAAAGA ACCAACTGTA
GTAACTGATA TTATTGACGA TGCAATCGAG CATGTAAATT TAATTTTAGA AGACAGAGAA
GGTACGGTTG TAAAACACTA TAATGCAGCA AGAACAACGT GTTTGATTAA TGAAGTGCAT
TTTACAAACG TATTAGTTAA TATTTTAGAG AATGCTATAA AGTATTCGCC GGGAACACCC
GAAATTGAAA TATTTACAGA AAATGTAAAA GATATGATCC TGATAAAAGT AAGAGATCAT
GGTTTAGGAA TGAGTAAGAT AGCTCAAAAA CGAGTGTTTG AGAAATTTTA CAGAGAACAT
ACAGGAGACC TTCATAATGT AAAAGGACAC GGTTTAGGTC TTGCTTATGT AAAAAGAATT
GTCGAGGATC ACAATGGACA AGTATATGTT GAAAGCGAAA AAGGAAAAGG TAGCACCTTT
ATAATAAAAA TACCATTAAT AAATTAA
 
Protein sequence
MNKLFFRILV LLMSLSLIGI ILVQVFWFNS SFKNNEEQFK YHVTQVIGNV ADKLEQQEEY 
SFYDKYNRIK DSTGKIPQKE DLLEVLYVQR NTKTNKTIVY SNTLSSEDYD IDGSLFNKRF
SSERFKNFSS KRVTEVYNNN NGIDNNSLGQ SIIPDLKIEK SGSLDILNKV QQQIQYKDIA
SLTPIEGRIT KDKLHKLLKK ELEEYGVKTK FEYGIYSSGV PTKIKSDGFH YDKEATYNIP
IYTDNEGNSR YELSVTFPNK KKFLLSELLS ITILSIVFTL IIIVAYTSAL NQLLRQKHIS
EIKTDFINNM THEFKTPIAT INLALDAIRS PKVIEDKEKV YRYLQMIRDE NKRMHAQVEN
VLRISKLEKR ELDITKEPTV VTDIIDDAIE HVNLILEDRE GTVVKHYNAA RTTCLINEVH
FTNVLVNILE NAIKYSPGTP EIEIFTENVK DMILIKVRDH GLGMSKIAQK RVFEKFYREH
TGDLHNVKGH GLGLAYVKRI VEDHNGQVYV ESEKGKGSTF IIKIPLIN