Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3461 |
Symbol | |
ID | 5089662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4126897 |
End bp | 4128483 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644742886 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001195794 |
Protein GI | 146301203 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0023015 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TATTTTTTAG AATACTTGTT TTATTGATGA GTTTGTCCTT AATAGGGATA ATTCTGGTAC AGGTATTTTG GTTCAATTCT TCATTTAAAA ATAATGAAGA ACAGTTTAAA TACCACGTTA CACAAGTAAT TGGAAATGTT GCAGATAAAC TTGAGCAGCA AGAAGAATAC AGTTTTTACG ACAAATACAA CCGTATAAAA GACAGTACCG GTAAAATTCC ACAAAAGGAA GACTTACTTG AAGTATTGTA TGTACAAAGA AACACAAAAA CAAATAAAAC AATTGTTTAT TCTAATACTC TAAGCTCTGA AGATTACGAT ATAGACGGAT CTCTTTTTAA TAAAAGATTC AGCAGCGAAA GATTTAAAAA TTTCAGCTCT AAAAGAGTAA CAGAAGTTTA TAATAATAAC AACGGAATTG ATAATAATAG TTTAGGTCAA AGTATTATTC CGGATCTTAA AATTGAAAAA TCCGGAAGTT TAGATATTTT AAATAAAGTT CAGCAGCAGA TTCAGTATAA AGACATTGCT TCATTAACCC CCATTGAAGG TCGAATTACA AAAGATAAAC TGCATAAACT ATTAAAAAAG GAATTAGAAG AATACGGTGT TAAAACCAAA TTCGAATACG GAATTTACAG CAGCGGTGTT CCAACCAAAA TTAAATCGGA TGGATTTCAC TATGACAAAG AAGCAACATA TAATATTCCG ATATATACTG ATAACGAAGG GAACAGCCGA TATGAATTAT CAGTTACCTT CCCAAATAAA AAGAAATTTT TATTATCTGA GTTATTAAGT ATTACTATTT TATCGATAGT ATTTACATTA ATTATAATAG TTGCTTACAC AAGTGCATTA AATCAATTAC TGCGTCAAAA ACATATTTCT GAAATCAAAA CAGATTTTAT TAATAATATG ACGCACGAGT TTAAAACACC AATTGCAACG ATTAACTTAG CTCTAGATGC TATCAGGAGT CCTAAAGTAA TTGAAGATAA AGAAAAAGTC TATCGATATC TTCAAATGAT AAGGGATGAA AATAAAAGAA TGCATGCCCA GGTTGAAAAT GTACTCCGTA TTTCTAAATT AGAAAAAAGA GAACTTGATA TTACAAAAGA ACCAACTGTA GTAACTGATA TTATTGACGA TGCAATCGAG CATGTAAATT TAATTTTAGA AGACAGAGAA GGTACGGTTG TAAAACACTA TAATGCAGCA AGAACAACGT GTTTGATTAA TGAAGTGCAT TTTACAAACG TATTAGTTAA TATTTTAGAG AATGCTATAA AGTATTCGCC GGGAACACCC GAAATTGAAA TATTTACAGA AAATGTAAAA GATATGATCC TGATAAAAGT AAGAGATCAT GGTTTAGGAA TGAGTAAGAT AGCTCAAAAA CGAGTGTTTG AGAAATTTTA CAGAGAACAT ACAGGAGACC TTCATAATGT AAAAGGACAC GGTTTAGGTC TTGCTTATGT AAAAAGAATT GTCGAGGATC ACAATGGACA AGTATATGTT GAAAGCGAAA AAGGAAAAGG TAGCACCTTT ATAATAAAAA TACCATTAAT AAATTAA
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Protein sequence | MNKLFFRILV LLMSLSLIGI ILVQVFWFNS SFKNNEEQFK YHVTQVIGNV ADKLEQQEEY SFYDKYNRIK DSTGKIPQKE DLLEVLYVQR NTKTNKTIVY SNTLSSEDYD IDGSLFNKRF SSERFKNFSS KRVTEVYNNN NGIDNNSLGQ SIIPDLKIEK SGSLDILNKV QQQIQYKDIA SLTPIEGRIT KDKLHKLLKK ELEEYGVKTK FEYGIYSSGV PTKIKSDGFH YDKEATYNIP IYTDNEGNSR YELSVTFPNK KKFLLSELLS ITILSIVFTL IIIVAYTSAL NQLLRQKHIS EIKTDFINNM THEFKTPIAT INLALDAIRS PKVIEDKEKV YRYLQMIRDE NKRMHAQVEN VLRISKLEKR ELDITKEPTV VTDIIDDAIE HVNLILEDRE GTVVKHYNAA RTTCLINEVH FTNVLVNILE NAIKYSPGTP EIEIFTENVK DMILIKVRDH GLGMSKIAQK RVFEKFYREH TGDLHNVKGH GLGLAYVKRI VEDHNGQVYV ESEKGKGSTF IIKIPLIN
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