Gene Fjoh_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3322 
Symbol 
ID5093040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp3969343 
End bp3969954 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content35% 
IMG OID644742749 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001195657 
Protein GI146301066 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.635912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA AAATTCTACG CATAATTACC AGTACCAATG GTGATACTTC ATTTAGTAAT 
CAGCTGTCGA ATGCTGTTAT TGAAAAATTA ACTGCAGGAA ATCCTGAAAC TGAAGTAAAA 
ACTCTTGACC TTACTAAAAC ACCTTTACCA TATTTGACTA ATTCGCATAT AAGTGCTGTA 
TATGCTCCTG AGGAAACTCA TACTCCGGAA CAGAAAGAAG CATTAAAATA TTCAAATGAA 
GCAATAAAAA CTTTATTAGA ATCGGATGTA ATTGTAATTG GTGTGCCTTT GTACAATTTT 
GGTATTCCGG CTGTTTTAAA AGGCTGGATT GATCAGATTG CGAGAGCAGG AAAAACTTTT 
AGTTACAGTG CCGAAGGACC AAAAGGATTG GTAACTGATA AAAAAGTGTA TTTATCAATT 
GCATCTGGTG CTATTTTTTC TGAAGGACCA TACAAAAGCT ACGATTTTTC AGAATCGTAT 
CTTCGAGCGG TATTTGGTTT TTTAGGAATG ACGGATGTTA CTACTTTTCG TGTAGAAGGA 
ACTGCAATTC CTGATTTTGC CGAAAATGCT TTACCAAAAG CCTTATCTTC TGTAGAAGAA 
TTTGCTTTTT AA
 
Protein sequence
MSQKILRIIT STNGDTSFSN QLSNAVIEKL TAGNPETEVK TLDLTKTPLP YLTNSHISAV 
YAPEETHTPE QKEALKYSNE AIKTLLESDV IVIGVPLYNF GIPAVLKGWI DQIARAGKTF 
SYSAEGPKGL VTDKKVYLSI ASGAIFSEGP YKSYDFSESY LRAVFGFLGM TDVTTFRVEG 
TAIPDFAENA LPKALSSVEE FAF