Gene Fjoh_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3195 
Symbol 
ID5093357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3808388 
End bp3809323 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content34% 
IMG OID644742623 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001195531 
Protein GI146300940 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.67739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGA TATTAGGTGC CAGCGGGCAG ATAGGAGAAG AACTTGCAAG AGAACTAAAA 
AGGAATTTTA CTTCAGATAT TAGAATTGTA AGCCGAAAAG CTCAAAAAGT TAATGATACT
GATACTGTTT TTTCAGCAGA TTTAATCAAT CGGGAAGAGG CTGTTGAAGC TGTTAAGGGA
AGTGAAATTG CTTATTTTAC ATTGGGACTT CCTATGGATT CTGATTTATG GGAAAAACAA
TTTTTGCTGA TTTTAAAAAA TACAATTGAA GCTTGTAAAA TAAACAAAAC AAAACTCGTA
TTTTTTGATA ACACATATAT GTATCCGCAG GATAACAGAG TCCTTACAGA AGATACAGTT
TTTGAGCCTG TGGGAAGAAA AGGGAAAATT AGAAAAGAGA TGGCTGAAAT GGTTTTAAGC
GAAATGCAGT CTGGTCAGTT AGAAGCTGTA ATTTGCCGTG CACCTGAATT TTATGGACCT
GATAAAACAC AAAGTATTAC GAACACATTA ATTTTCAAGG CAGTTAAGGA ACATAAAAAG
CTAAAAGTAC CTTTGAGCGC TACAAAGAAA AGAAGCCTTA TTTGGACGCC TGATGCAAGC
AGGGCGACAG CATTAATAGG AAATACTCCA GATGCTTTTT ATCAAACCTG GCATTTGCCT
GTCGATGAAA GTCATCTTAG TTATAAAGAG TTTATTGCAT TGGCCTCTAA TGTTTATGGC
AGAGAGTTAA AATATGCTGT TATTCCTAAG TTTGTATTTA AAATAGGGTC GCTTTTTAAT
AAAAGAATGA AAGAATTACA GGAACTGCTT CCGAGATATG AACATGATAA TATTTTTGAT
GATTCGAAAT TTAGAAAGCG TTTTCCGGAT TTTGAAATAA CAAATTATAA AAAGGGAATC
GAAAGGATTA AAGAGGAGCA GGAAATTAGT AAATAA
 
Protein sequence
MQTILGASGQ IGEELARELK RNFTSDIRIV SRKAQKVNDT DTVFSADLIN REEAVEAVKG 
SEIAYFTLGL PMDSDLWEKQ FLLILKNTIE ACKINKTKLV FFDNTYMYPQ DNRVLTEDTV
FEPVGRKGKI RKEMAEMVLS EMQSGQLEAV ICRAPEFYGP DKTQSITNTL IFKAVKEHKK
LKVPLSATKK RSLIWTPDAS RATALIGNTP DAFYQTWHLP VDESHLSYKE FIALASNVYG
RELKYAVIPK FVFKIGSLFN KRMKELQELL PRYEHDNIFD DSKFRKRFPD FEITNYKKGI
ERIKEEQEIS K