Gene Fjoh_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3192 
Symbol 
ID5093354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3805056 
End bp3805913 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content39% 
IMG OID644742620 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001195528 
Protein GI146300937 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAA CAATTTTCAT TACAGGAACA AGTACAGGCT TTGGAAAATT AACAGCTTTA 
ACATTAGCAA ACGCTGGTCA TTCAGTAATT GCAGGAATGC GCAACACAAA TGATAAAAAT
GCCGCAGCCG CAAAAGAACT GGGAGCAGTA GAAAACATTG AAGTAGTAGA TATCGATGTT
ACTGATGATG CATCAGTTAA CAAAGCCATC GAAAAAGTAA TCACTAAATA CGGCAAAATT
GATGTATTGA TAAACAATGC AGCAGTAAGC GGTTTTGGTC TGCTTGAAGG CTACTCAATC
GATCAGGTTC GCAAAATGTT CGATGTAAAC GTTTACAGCG TGCTTCGTAT GTATCAGGCG
GTGCTTCCTT CTATGAGAAA AGAAAGAAAC GGACTTGTCA TTAATATTAC AACCGGAGCA
AGCGGACACA CACTTCCTTT TATGGTTCCG TATATCGCAT CAAAACTTGT AGTAGAAAGT
TTTACAGAAG GATTGCAAGA TGAACTTGCT GATTACGGAA TTGAAAATGT AAGCATCCAG
CCTGGAGTTT ATCCAACAGA AATGAATAAC GGATCGAAAG CGGGTATTTA TGCTGATAAA
ACAGAAATTA TAGAACAATA CGGCGAAGCT GCAACAGAAA AATTCAACGC ATTGGGCACA
GCATTATTTG GCAAAATGGC ACAGTTCGAT ATGAATCCGC AGACTATTGC CGATGGTATT
CTGGAGTTGG TAAGCATGAA AAAAGGAGAG AGACCGCTTC GTTTTCCGCT TGATGCCATT
GCTCAGGGAA CTGATAAAGA ATTTATAGAA GCCCGTGCTG CTATTAAAGC AAAATGGGTA
GCTGCTTACA CTAATTAA
 
Protein sequence
MSKTIFITGT STGFGKLTAL TLANAGHSVI AGMRNTNDKN AAAAKELGAV ENIEVVDIDV 
TDDASVNKAI EKVITKYGKI DVLINNAAVS GFGLLEGYSI DQVRKMFDVN VYSVLRMYQA
VLPSMRKERN GLVINITTGA SGHTLPFMVP YIASKLVVES FTEGLQDELA DYGIENVSIQ
PGVYPTEMNN GSKAGIYADK TEIIEQYGEA ATEKFNALGT ALFGKMAQFD MNPQTIADGI
LELVSMKKGE RPLRFPLDAI AQGTDKEFIE ARAAIKAKWV AAYTN