Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3192 |
Symbol | |
ID | 5093354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3805056 |
End bp | 3805913 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644742620 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001195528 |
Protein GI | 146300937 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA CAATTTTCAT TACAGGAACA AGTACAGGCT TTGGAAAATT AACAGCTTTA ACATTAGCAA ACGCTGGTCA TTCAGTAATT GCAGGAATGC GCAACACAAA TGATAAAAAT GCCGCAGCCG CAAAAGAACT GGGAGCAGTA GAAAACATTG AAGTAGTAGA TATCGATGTT ACTGATGATG CATCAGTTAA CAAAGCCATC GAAAAAGTAA TCACTAAATA CGGCAAAATT GATGTATTGA TAAACAATGC AGCAGTAAGC GGTTTTGGTC TGCTTGAAGG CTACTCAATC GATCAGGTTC GCAAAATGTT CGATGTAAAC GTTTACAGCG TGCTTCGTAT GTATCAGGCG GTGCTTCCTT CTATGAGAAA AGAAAGAAAC GGACTTGTCA TTAATATTAC AACCGGAGCA AGCGGACACA CACTTCCTTT TATGGTTCCG TATATCGCAT CAAAACTTGT AGTAGAAAGT TTTACAGAAG GATTGCAAGA TGAACTTGCT GATTACGGAA TTGAAAATGT AAGCATCCAG CCTGGAGTTT ATCCAACAGA AATGAATAAC GGATCGAAAG CGGGTATTTA TGCTGATAAA ACAGAAATTA TAGAACAATA CGGCGAAGCT GCAACAGAAA AATTCAACGC ATTGGGCACA GCATTATTTG GCAAAATGGC ACAGTTCGAT ATGAATCCGC AGACTATTGC CGATGGTATT CTGGAGTTGG TAAGCATGAA AAAAGGAGAG AGACCGCTTC GTTTTCCGCT TGATGCCATT GCTCAGGGAA CTGATAAAGA ATTTATAGAA GCCCGTGCTG CTATTAAAGC AAAATGGGTA GCTGCTTACA CTAATTAA
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Protein sequence | MSKTIFITGT STGFGKLTAL TLANAGHSVI AGMRNTNDKN AAAAKELGAV ENIEVVDIDV TDDASVNKAI EKVITKYGKI DVLINNAAVS GFGLLEGYSI DQVRKMFDVN VYSVLRMYQA VLPSMRKERN GLVINITTGA SGHTLPFMVP YIASKLVVES FTEGLQDELA DYGIENVSIQ PGVYPTEMNN GSKAGIYADK TEIIEQYGEA ATEKFNALGT ALFGKMAQFD MNPQTIADGI LELVSMKKGE RPLRFPLDAI AQGTDKEFIE ARAAIKAKWV AAYTN
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