| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3171 |
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| Symbol | |
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| ID | 5093333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 3773929 |
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| End bp | 3775446 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644742599 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001195507 |
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| Protein GI | 146300916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.902274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACC TATTAGACAA TGCCCCGGAT GTCTTTGTTA AAAGCGCCGC TGACGATTTT
TATCAGGATA TTTTTCATGA AAATTCCGGA ACAGAATATG CCAATGCCAT AGAATTAGTT
CAAAAACGTG TAGCAGGTTT TCTTGAAAAT ACTAAAATCC CGTTCAGCGG TATTAAACCT
GACGAAATAC GAAATAAAGT AGAAGCTGTA AACCTTGATC AGCCAGTTCA GGATTATGAA
ACCCTTTGGG ACGAGATCGA TGAAATTTAT GTAAATCATG CCACTGCTTA CCATTTACCA
GAATATATAG CCCACTTAAA CTGCCCTGTT GTAATTCCTG CTTTAGCAGC CGATGTATTG
ATTAGCGCTA TTAACTCATC GCAAGACACG TATGACCAAA GTGCAGGTGG AACATTCATT
GAAAGAAAAT TGATTGCCTG GACTGGCGAA CAAATTGGAT ATAATGTAGA TTGTGATGGT
ATTTTTACTG GCGGCGGATC ACAAAGTAAC CTTATGGGAC TGCTATTGGC CAGAGATTAT
TTTGCTTTAA AATACCTCAA CTGGAACATC AAATTAAATG GCTGTCCGCC GGATTCAAGT
AAATTCAGAA TTTTTGTTTC AGAGAAATCT CATTTCAGCA ATCAAAAAAA TGCTTCTATT
CTAGGTCTTG GCGAGCAGTC TATTGTTCAG GTTGTAACAG ACAGCCGTTA CAGAATGGAC
GCTGAAAAAT TAAAGCAGGC CATTCTTGAA GAAAAAGAAA AAGGCAACAT TCCTATTGCT
ATTGTGGCTA CAGCAGGAAC AACAGATTTT GGGAACATCG ATCCATTATC TGAAATTTCA
GTTTTGGCAA AAGAACATGA ATTATGGATG CATGTTGACG CCGCTTATGG CTGCGGGTTA
TTGCTGACAG ATACATACAA ACATTTGTTA AACGGAATTG AACAAGCTGA TTCTGTTACA
ATTGATTATC ATAAATCTTT CTTTCAGCCT ATTTGCAGCA GTGCTTTTAT GGTGAGAAAC
AAACAGCATC TTCATATCAT AAAACATCAT GCTGATTATT TAAATCCAAA AGAACAGGAT
TACGATGAAC TTCCGGCACA AATAAACAAA TCTCTGGTAC AAAGTACACG CCGTTTTGAT
GCTTTAAAAC TATGGTGTAC ACTGCGTTAT ATGGGAAGAA CTAAACTTGG ACAGTATACA
GATACCATTA TTGAAACGAC CAAACAAACA GCTGAAATAC TGGAAAACGA CAAAGACTTT
GAACTCTTAA CAGATTCTGA TTTAAGTGTT TTGGTTTTTA GATACAAACT AGACGGCTGG
CCTGGAGACA CTTGTAAAAT GAACTTACAC ATCAAAAAGA AAATGTTTTT TAACGGTGAA
GTCTTAGTGG CAAGCACAAA AGTAAACGGC ATTTTTTACC TCAAGTTTAC CATTTTGAAT
CCATTAACAA CAATCGCACA CATCAATAAT ATCCTTTCAA TTATAAAAAA ACACGGAAAT
GACTACATCT TCTCCTAA
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| Protein sequence | MQNLLDNAPD VFVKSAADDF YQDIFHENSG TEYANAIELV QKRVAGFLEN TKIPFSGIKP
DEIRNKVEAV NLDQPVQDYE TLWDEIDEIY VNHATAYHLP EYIAHLNCPV VIPALAADVL
ISAINSSQDT YDQSAGGTFI ERKLIAWTGE QIGYNVDCDG IFTGGGSQSN LMGLLLARDY
FALKYLNWNI KLNGCPPDSS KFRIFVSEKS HFSNQKNASI LGLGEQSIVQ VVTDSRYRMD
AEKLKQAILE EKEKGNIPIA IVATAGTTDF GNIDPLSEIS VLAKEHELWM HVDAAYGCGL
LLTDTYKHLL NGIEQADSVT IDYHKSFFQP ICSSAFMVRN KQHLHIIKHH ADYLNPKEQD
YDELPAQINK SLVQSTRRFD ALKLWCTLRY MGRTKLGQYT DTIIETTKQT AEILENDKDF
ELLTDSDLSV LVFRYKLDGW PGDTCKMNLH IKKKMFFNGE VLVASTKVNG IFYLKFTILN
PLTTIAHINN ILSIIKKHGN DYIFS
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