| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3110 |
|---|
| Symbol | |
|---|
| ID | 5093106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3679098 |
|---|
| End bp | 3680459 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644742538 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001195446 |
|---|
| Protein GI | 146300855 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3345] Alpha-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.855481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AAATCACATT GGTGTTAGGA ATCGTTTTGG TTTCGATTTC TTCACATTCG
CAGTATAAAA CATTTCAAAA TGAAGAATTC AAACAATGGG CACAAACACC GCCAATGGGC
TGGAACAGCT GGGATTGTTA CGGGCCGACA GTCGAAGAAC ACGAGGTTAA AACCAACGCC
GATTATATGG CAAAAGAGCT TAAGAAATTC GGCTGGGAAT ATGTAGTAGT TGATATTAGA
TGGTTTGTCG AAAATGATAA AGCGGGAGGT TACAACCAAA CCGATCCGAG ATATGTAATG
GATGAGTACG GAAGATATAT GCCAGCTGTA AACCGTTTCC CATCTGCCAA AGACGGACAG
GGTTTTAAGC CTTTAGCCGA TTATATTCAT AAAAAAGGAT TGAAATTCGG AATCCATATC
ATGAGAGGGA TTCCTAAAAA AGCAGTCGAA AACAAACTGC CAATAAAAGG AACAAACGGA
ATTACCGCCG ACCAAGTTTA TTCTACCGCT TTGCAATGTG AATGGTTACG AGATAATTAT
ACTGTTTTGG CAGACAAACC AGGCGCACAG GAATATTACA ATTCTATTTT TGAATTGTAT
GCAAAATGGG GTGTAGATTT TATTAAAATT GATGATTTAT CACGACCTTA TCATGAAGGC
GAAATCAACT TAATTCGAAA CGCCATTGAC AAATGCGGCC GTAAAATTGT CTTGAGTACT
TCGCCGGGAG AAACGCCGAT TTCGGCTGCT TCGCACGTAA GCACGCATGC TAATATGTGG
CGTATGGTTG ACGATGTTTG GGATACATGG CCGCATATCA CACATTTAAT GGATGTGGCT
CAAAAATGGT ATCCGTATAT CGCTCCGGGA ACTTGGCCGG ATTGTGATAT GATTCCGTTA
GGAAGAATTT CAATCAGAGG CGAACGCGGA AAAGATCGAA TGACGCGTTT GACAAAAGAC
GAACAATATA CTTTAATCAC GTTTTTCAAT ATTTTTAAAT CACCATTATT TTTTGGTGGT
GATTTGCCCA GCAATGATGC TTTTACGCTT TCATTATTAA CAAATAAAGA AGTTGTAAAA
ATGCATAACG AAAGCACAGA TGTAAAAGAG CTTTTTCAGA AAGATGGGAA AATTGCTGTT
ACTTCAAAAG CAAAAGATGG AAGTGTCTAT CTCGCATTAT TTAATATCGC TGATAACGCT
TCTCAAAAAG TCTCTGTAAA TCTTTCAGAT CTTGGAATTT CTGGTTCTGT TGATGTTTTA
AATATGTGGA CAGGAGAAAA ATCAAAAGTG ACTTCAACAG AAATTGGTAC CGATTTAAAA
CCGCACAGTT CTGTTTTGTA CCAATTAAAA AGTAAAAAAT AA
|
|---|
| Protein sequence | MKNKITLVLG IVLVSISSHS QYKTFQNEEF KQWAQTPPMG WNSWDCYGPT VEEHEVKTNA
DYMAKELKKF GWEYVVVDIR WFVENDKAGG YNQTDPRYVM DEYGRYMPAV NRFPSAKDGQ
GFKPLADYIH KKGLKFGIHI MRGIPKKAVE NKLPIKGTNG ITADQVYSTA LQCEWLRDNY
TVLADKPGAQ EYYNSIFELY AKWGVDFIKI DDLSRPYHEG EINLIRNAID KCGRKIVLST
SPGETPISAA SHVSTHANMW RMVDDVWDTW PHITHLMDVA QKWYPYIAPG TWPDCDMIPL
GRISIRGERG KDRMTRLTKD EQYTLITFFN IFKSPLFFGG DLPSNDAFTL SLLTNKEVVK
MHNESTDVKE LFQKDGKIAV TSKAKDGSVY LALFNIADNA SQKVSVNLSD LGISGSVDVL
NMWTGEKSKV TSTEIGTDLK PHSSVLYQLK SKK
|
|---|
| |