Gene Fjoh_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2813 
Symbol 
ID5093258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3347758 
End bp3350079 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content28% 
IMG OID644742243 
ProductO-antigen polymerase 
Protein accessionYP_001195154 
Protein GI146300563 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.192356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG CAAAAATTGA CCGCATAATT AATGAAACGA AGGAGAAGAA AAAAATCTCA 
AATTTTGTAA CTCTTTCATT TATTGTATCA TTACTTATAA TCGATTTTCT TCCATATTTC
AAAAGTCTGG AAATTATCAA TCCGCAATTT CTCTACTTAT CAGTTATTAA TCTAATCTTT
GGTATTTATT TTTACTTTAA CACCAATGTA CTTTCTAATA CTGTTTTTTC ATTATTAAAA
CGCAGTTATA TTTTTAGATT ATATCTGGCT TTTATTTTAT TATGCGGGAT TTCATTGTTT
TCAGCAAAAA ATTCCTCTTT AGTTTTTACA AAATTTACCG AAATAGCAAT TGTATTTTGT
CTTTTTATAA ATCTCACTAT TCTGCTCAAA GACAAATTTG ACCTGCTGTA TAAAATAGTA
CTGATAATTG GAATCAGCGC CTTTTTTCAA TCGTTGCAGC AATTACAAAA CTTTCTCATC
ATTCCTAAAA ACACTTCAAT TATGGATCTT CTTTGGAGCA TGAAAGGAAA TACGGGAAAT
ATAAATATAC TTGCCGCCAG TCTTACTATT AAAATCCCAT TTCTATTATT GGGAATTACA
CATTTTAATA GTTACAAGAA AATATTCTTT ACAGTCACCC TGTTTTCTGT GGTATCAGTT
ATTTTTTTAA CAGGAGCAAG AACTCCATTA ATTAATCTGT TTTTAATCTT TTTTATTTAT
ATCGTTTATC TGCTAAAAGA AAATACTTTC AGTAAACCAG GTTTTATAAA AATTATATAC
TTGATTGTTC CTGTTTTATG TGCAGTTTTG TATACAAACT CAATTTTTGA AAAATCTAAA
GACAACAATC GATATGTTGC ATTAGAAAAC AGAATTGAAA GAATTAACGC TGAGGATAAT
TCGTCAAAAG CAAGGCTTAC ATTTTGGGGA AATGCTTTTG AAATGATTAA AAAAAATCCA
ATACTTGGCA TTGGATTAGG TAATTATCAA ATAGAATCTA TTCCGTATGA AAAAACTACT
TCTTACGATT TAATTGTTTC CCTTCATGCA CATAATGATT TTATTGAAAT TTCTGCAGAA
ACAGGAATTA TAAATGGCTT GATTTATTTA TCCATTTTTA TACTGATTTT CAGTATCAAT
TTAAAAAATG TTCTAAAATC AAATGATTCA CATACAAGAT TAACAGCGCT TTTGACCTTA
ATGCTGGTTA TTGTTTATGG AGTTGATTCC CTTTTTAACT TTCCTATGTA CAGACCAACA
ATGTCTATTT TCTTTAGTTT AATTCTGGCC TTTACTGTTC TAAATAATTT TAAAGACAAA
AATTTACAGC AAACTTCAAA TAAAACTATT AAGATTATAG CTGTGACTTT AATTGTGGTT
TCTTTAATTA CCAGTTATTC TGCGTTTTTA ATATATAGAG CATCAAATCT GGAATATTTA
ATTGTAACAG ATAATATAAA CGTAAATACT AAAGGAGCTC TTAACGGTGA CGAAGTGATG
AGAAGAATGC CGGCATATCC TAATGTTTTT AATACTTCAG AGTCATTTTA TGAATATGCG
GGGATTTACT ATATCCGTGA AAAGAATTAC AGCATGGCCT TAAAATGTTT TTCGAGAGCC
TCAAAAATCA ACCCATATTT AGGCAGAATC GATTTTTACA AACACGTTAT TTCTAATGAA
AAAGGAAATA TTGACAGCGC TTATATATAT GTGAAAAAAG CATTTTACAG ATACCCTGTA
AATTACGGTA TTTACTCCAT ATCAGCAGCC ATGGCGGCAA AAATGAAAGA CACTACAGAA
ATTTTAAAAG AACATGCACT ATTTAGTAAA TATAGAAACC ATCCGGAAGA ATTGAATCTA
ACCTTATCAA ATCTAAAAAC GGCAGGTTAT AACTATAAAT CACAATTGAA TTTTATAAAC
AAAAGCTTAA TCAAATCTCC TGCAGACAGT ACATTATTAA AAAAGAAAAA AGATTTACTT
GTAACGGATT ATCTTGTAAA AGGTCAAAGT TTTGAATCTC AATCAAAATT AGATAAAGCA
CTGGAATACT ATGAAAAAGC TTTAAAAACA GATCCTAATA GTCCATATCC ATTACAAAAT
ATAGGGTTTT ATTATTATAA AGCCGGACAG GATAAAAAAG CAATAAGTTA CTTATTGAAT
GCTTTAAAAT ATCCCGGACT ATACGATGGA AAAACAGAAT TTTTTATTGG AATATGTTAC
TTGAGAGAAC AGGATAAAGC AAATGCCTGT AAATATTTTA ATATTGCCAA GAACAAAAAA
TATTCTCAGG TAAATCAATC AATTTTGCAA AGTTGTAAAT AA
 
Protein sequence
MSTAKIDRII NETKEKKKIS NFVTLSFIVS LLIIDFLPYF KSLEIINPQF LYLSVINLIF 
GIYFYFNTNV LSNTVFSLLK RSYIFRLYLA FILLCGISLF SAKNSSLVFT KFTEIAIVFC
LFINLTILLK DKFDLLYKIV LIIGISAFFQ SLQQLQNFLI IPKNTSIMDL LWSMKGNTGN
INILAASLTI KIPFLLLGIT HFNSYKKIFF TVTLFSVVSV IFLTGARTPL INLFLIFFIY
IVYLLKENTF SKPGFIKIIY LIVPVLCAVL YTNSIFEKSK DNNRYVALEN RIERINAEDN
SSKARLTFWG NAFEMIKKNP ILGIGLGNYQ IESIPYEKTT SYDLIVSLHA HNDFIEISAE
TGIINGLIYL SIFILIFSIN LKNVLKSNDS HTRLTALLTL MLVIVYGVDS LFNFPMYRPT
MSIFFSLILA FTVLNNFKDK NLQQTSNKTI KIIAVTLIVV SLITSYSAFL IYRASNLEYL
IVTDNINVNT KGALNGDEVM RRMPAYPNVF NTSESFYEYA GIYYIREKNY SMALKCFSRA
SKINPYLGRI DFYKHVISNE KGNIDSAYIY VKKAFYRYPV NYGIYSISAA MAAKMKDTTE
ILKEHALFSK YRNHPEELNL TLSNLKTAGY NYKSQLNFIN KSLIKSPADS TLLKKKKDLL
VTDYLVKGQS FESQSKLDKA LEYYEKALKT DPNSPYPLQN IGFYYYKAGQ DKKAISYLLN
ALKYPGLYDG KTEFFIGICY LREQDKANAC KYFNIAKNKK YSQVNQSILQ SCK