Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2813 |
Symbol | |
ID | 5093258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3347758 |
End bp | 3350079 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644742243 |
Product | O-antigen polymerase |
Protein accession | YP_001195154 |
Protein GI | 146300563 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.192356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTG CAAAAATTGA CCGCATAATT AATGAAACGA AGGAGAAGAA AAAAATCTCA AATTTTGTAA CTCTTTCATT TATTGTATCA TTACTTATAA TCGATTTTCT TCCATATTTC AAAAGTCTGG AAATTATCAA TCCGCAATTT CTCTACTTAT CAGTTATTAA TCTAATCTTT GGTATTTATT TTTACTTTAA CACCAATGTA CTTTCTAATA CTGTTTTTTC ATTATTAAAA CGCAGTTATA TTTTTAGATT ATATCTGGCT TTTATTTTAT TATGCGGGAT TTCATTGTTT TCAGCAAAAA ATTCCTCTTT AGTTTTTACA AAATTTACCG AAATAGCAAT TGTATTTTGT CTTTTTATAA ATCTCACTAT TCTGCTCAAA GACAAATTTG ACCTGCTGTA TAAAATAGTA CTGATAATTG GAATCAGCGC CTTTTTTCAA TCGTTGCAGC AATTACAAAA CTTTCTCATC ATTCCTAAAA ACACTTCAAT TATGGATCTT CTTTGGAGCA TGAAAGGAAA TACGGGAAAT ATAAATATAC TTGCCGCCAG TCTTACTATT AAAATCCCAT TTCTATTATT GGGAATTACA CATTTTAATA GTTACAAGAA AATATTCTTT ACAGTCACCC TGTTTTCTGT GGTATCAGTT ATTTTTTTAA CAGGAGCAAG AACTCCATTA ATTAATCTGT TTTTAATCTT TTTTATTTAT ATCGTTTATC TGCTAAAAGA AAATACTTTC AGTAAACCAG GTTTTATAAA AATTATATAC TTGATTGTTC CTGTTTTATG TGCAGTTTTG TATACAAACT CAATTTTTGA AAAATCTAAA GACAACAATC GATATGTTGC ATTAGAAAAC AGAATTGAAA GAATTAACGC TGAGGATAAT TCGTCAAAAG CAAGGCTTAC ATTTTGGGGA AATGCTTTTG AAATGATTAA AAAAAATCCA ATACTTGGCA TTGGATTAGG TAATTATCAA ATAGAATCTA TTCCGTATGA AAAAACTACT TCTTACGATT TAATTGTTTC CCTTCATGCA CATAATGATT TTATTGAAAT TTCTGCAGAA ACAGGAATTA TAAATGGCTT GATTTATTTA TCCATTTTTA TACTGATTTT CAGTATCAAT TTAAAAAATG TTCTAAAATC AAATGATTCA CATACAAGAT TAACAGCGCT TTTGACCTTA ATGCTGGTTA TTGTTTATGG AGTTGATTCC CTTTTTAACT TTCCTATGTA CAGACCAACA ATGTCTATTT TCTTTAGTTT AATTCTGGCC TTTACTGTTC TAAATAATTT TAAAGACAAA AATTTACAGC AAACTTCAAA TAAAACTATT AAGATTATAG CTGTGACTTT AATTGTGGTT TCTTTAATTA CCAGTTATTC TGCGTTTTTA ATATATAGAG CATCAAATCT GGAATATTTA ATTGTAACAG ATAATATAAA CGTAAATACT AAAGGAGCTC TTAACGGTGA CGAAGTGATG AGAAGAATGC CGGCATATCC TAATGTTTTT AATACTTCAG AGTCATTTTA TGAATATGCG GGGATTTACT ATATCCGTGA AAAGAATTAC AGCATGGCCT TAAAATGTTT TTCGAGAGCC TCAAAAATCA ACCCATATTT AGGCAGAATC GATTTTTACA AACACGTTAT TTCTAATGAA AAAGGAAATA TTGACAGCGC TTATATATAT GTGAAAAAAG CATTTTACAG ATACCCTGTA AATTACGGTA TTTACTCCAT ATCAGCAGCC ATGGCGGCAA AAATGAAAGA CACTACAGAA ATTTTAAAAG AACATGCACT ATTTAGTAAA TATAGAAACC ATCCGGAAGA ATTGAATCTA ACCTTATCAA ATCTAAAAAC GGCAGGTTAT AACTATAAAT CACAATTGAA TTTTATAAAC AAAAGCTTAA TCAAATCTCC TGCAGACAGT ACATTATTAA AAAAGAAAAA AGATTTACTT GTAACGGATT ATCTTGTAAA AGGTCAAAGT TTTGAATCTC AATCAAAATT AGATAAAGCA CTGGAATACT ATGAAAAAGC TTTAAAAACA GATCCTAATA GTCCATATCC ATTACAAAAT ATAGGGTTTT ATTATTATAA AGCCGGACAG GATAAAAAAG CAATAAGTTA CTTATTGAAT GCTTTAAAAT ATCCCGGACT ATACGATGGA AAAACAGAAT TTTTTATTGG AATATGTTAC TTGAGAGAAC AGGATAAAGC AAATGCCTGT AAATATTTTA ATATTGCCAA GAACAAAAAA TATTCTCAGG TAAATCAATC AATTTTGCAA AGTTGTAAAT AA
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Protein sequence | MSTAKIDRII NETKEKKKIS NFVTLSFIVS LLIIDFLPYF KSLEIINPQF LYLSVINLIF GIYFYFNTNV LSNTVFSLLK RSYIFRLYLA FILLCGISLF SAKNSSLVFT KFTEIAIVFC LFINLTILLK DKFDLLYKIV LIIGISAFFQ SLQQLQNFLI IPKNTSIMDL LWSMKGNTGN INILAASLTI KIPFLLLGIT HFNSYKKIFF TVTLFSVVSV IFLTGARTPL INLFLIFFIY IVYLLKENTF SKPGFIKIIY LIVPVLCAVL YTNSIFEKSK DNNRYVALEN RIERINAEDN SSKARLTFWG NAFEMIKKNP ILGIGLGNYQ IESIPYEKTT SYDLIVSLHA HNDFIEISAE TGIINGLIYL SIFILIFSIN LKNVLKSNDS HTRLTALLTL MLVIVYGVDS LFNFPMYRPT MSIFFSLILA FTVLNNFKDK NLQQTSNKTI KIIAVTLIVV SLITSYSAFL IYRASNLEYL IVTDNINVNT KGALNGDEVM RRMPAYPNVF NTSESFYEYA GIYYIREKNY SMALKCFSRA SKINPYLGRI DFYKHVISNE KGNIDSAYIY VKKAFYRYPV NYGIYSISAA MAAKMKDTTE ILKEHALFSK YRNHPEELNL TLSNLKTAGY NYKSQLNFIN KSLIKSPADS TLLKKKKDLL VTDYLVKGQS FESQSKLDKA LEYYEKALKT DPNSPYPLQN IGFYYYKAGQ DKKAISYLLN ALKYPGLYDG KTEFFIGICY LREQDKANAC KYFNIAKNKK YSQVNQSILQ SCK
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