Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2781 |
Symbol | |
ID | 5093226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3313652 |
End bp | 3315316 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644742211 |
Product | 2-oxoglutarate decarboxylase |
Protein accession | YP_001195122 |
Protein GI | 146300531 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0550366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTACC CCAAAATAGC GCTTGCACAA AGCATTATCG AAATTTGTTC AGCAAAAGGA ATTTACAATA TAATAATTTC TCCAGGTTCG CGAAACGCAC CTTTGACTAT TGGTTTCGCA CAAAATCCAA ATTTTAAATG TTACAGTATT GCCGATGAAC GATGCGCTGC ATTTTTTGCT TTAGGAATTG CACAGCAAAC CCAAAAGCCA GCTGCAGTAG TTTGTACATC CGGATCTGCA TTGCTAAACT ATTATCCGGC TGTGGCCGAA GCTTTTTACA GTCAGATACC TTTAATTGTA ATTTCAGCAG ACCGCCCGCA GAGTAAAATT GATATTGGAG ACGGACAAAC CATTCGTCAG GAAAATGTCT TTTTAAATCA TTCTGTTTTT AATGCCAATT TAACCGAAGA TGCTTCTGTA GAAAATGATT TAAAAATTAA TAAAGCTATA GAAACCGCTA TTCTTCAAAA AGGTCCGGTT CATATTAATG CACCTTTTGA AGAACCTTTA TACCAAACAG TTTCAGAACT TTCGGTTGAG CCTAAAATTA CCAATCTGGA AGAATTCCTC GAAACAAAAA TCATCGAAAA CGAAGATGAA ATTGTTTCAA TCTGGAACTC ATCCAAAAGA AAATTAATCC TTATTGGAGG AATAAACGAA GCCAATTCGA TCGATGATGC CGTTTTAGAA AACTTTGCCA AAGATCCGTC TATTGTGGTA CTTACAGAAA CAACATCAAA TCTGCATCAC CCAAGTTTTA TTAACAGCAT CGACAGCTTA ATTACACCTT TTGATGATTC AGATTTTAAA GAATTGGAGC CGGAAGTCTT AATTACTTTT GGAGGTATGA TAGTATCAAA ACGAATTAAA GCTTTTCTGC GAAAATATAA ACCTGTACAT CACTGGCATA TAGATACATT ACGTGCTTAT GATACATTCA ATGCTTTAAG TAAACATTTT GTAATGGAAC CCAATGATTT TTTCAAAAAT CTGCTTCCAA AAACAGAATT TGTTACCAGT AAATATTTTT CAAAAATTGA TAAAATTTAC GATTTAAGAA AAATCAAAAA GAAGCAATAT TTGTCTAAAA TTGGTTTCTC TGATTTTAAA GTATTTGAAA AAGTAATTGA ATCACTTCCA AAAAACAGTC AGCTGCAAAT CAGTAACAGT TCAGCCATTC GATATGCACA ATTAATTGAA ATTGATCCTT CAATAGAGGT TTTCTGTAAC AGAGGAACAA GCGGTATAGA CGGAAGTACT TCGACTGCTG TTGGTGCAGC TGTTGGAAGT GGTAAACCAA ATGTATTTAT TACCGGAGAT ATCAGCTTTT TGTACGACAG CAATGCTTTA TGGAACTCTT ATATACCTAA GAATTTCAAA ATTATATTGA TTAATAATGG AGGAGGGGGA ATCTTTAGAA TTTTGCCTGG GCATCAGGAA AAACCTGTTT TTAATACTTA TTTTGAAACT TCGCATCATT TAACAGCAGA GCATTTGGCT AAAATGTACC AATGCAGTTA TTTTAAAGCA GATGATTTAT CTTCTTTAAA TGAAAATTTA GAATTACTAT ACAATTCTAA TGAAGCACCC GGAATTTTAG AAGTCTTTAC CCCAACTTTT GAAAATGATG TTATTCTAAA ACAATACTTT AAAGAGCTTA CATAA
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Protein sequence | MIYPKIALAQ SIIEICSAKG IYNIIISPGS RNAPLTIGFA QNPNFKCYSI ADERCAAFFA LGIAQQTQKP AAVVCTSGSA LLNYYPAVAE AFYSQIPLIV ISADRPQSKI DIGDGQTIRQ ENVFLNHSVF NANLTEDASV ENDLKINKAI ETAILQKGPV HINAPFEEPL YQTVSELSVE PKITNLEEFL ETKIIENEDE IVSIWNSSKR KLILIGGINE ANSIDDAVLE NFAKDPSIVV LTETTSNLHH PSFINSIDSL ITPFDDSDFK ELEPEVLITF GGMIVSKRIK AFLRKYKPVH HWHIDTLRAY DTFNALSKHF VMEPNDFFKN LLPKTEFVTS KYFSKIDKIY DLRKIKKKQY LSKIGFSDFK VFEKVIESLP KNSQLQISNS SAIRYAQLIE IDPSIEVFCN RGTSGIDGST STAVGAAVGS GKPNVFITGD ISFLYDSNAL WNSYIPKNFK IILINNGGGG IFRILPGHQE KPVFNTYFET SHHLTAEHLA KMYQCSYFKA DDLSSLNENL ELLYNSNEAP GILEVFTPTF ENDVILKQYF KELT
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