Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2713 |
Symbol | |
ID | 5090509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3231084 |
End bp | 3233075 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644742136 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001195054 |
Protein GI | 146300463 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0942684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATC AAAATAAACT TCATTGTATA ATGTCCCTTT GTCTGGCAGG TTTTACATCA ATTGCCTTTG CACAAAAAAT TGAATTAAAA AGTAATTGGA CATATCGTGA AGAAAAAACA CAAAAATGGT ATACGGCCAG CGTTCCGGGA GAAATCCATA CCGATTTGCT AAACAGCAAA TTAATACCAG ACCCATTTTA CAGAGATAAC GAAAAAAAAC TGCAGTGGAT CGAACGTAAA AACTGGGAAT ACAAAACTGC TTTTCAGGTT ACGGCAAATA TGCTGAAAAA GAAAAATACA GAATTAGTTT TTGACGGATT AGATACTTAC GCAGCTGTTT ATGTAAACAA TCAGCTGGTT TTAAAAGCCG ATAATATGTT CCGTCAATGG CGGGTTGATG TAAAAAAAGT CTTGAAATCA GGAAATAATG ATTTACGAAT CGTATTTCAA TCGGCACAAA ATGTGGTAGA TTCATTGGCA AAAAAAGATT ACCCATTTGT AATTCCAGAC AATCCGCGTA CTTATGTACG CAAAGCCCAA TACCATTTTG GCTGGGATTG GGGACCAAAA TTCACAACCT GCGGCATATG GAAAACACCA AGATTTGAAG CTTATGATGA AAAAGAACCT GAGAAACCGT ATGTATTAAC TCGAAAAATC GAATTAATAC AAGACAAAGA CAGTCTTGGC AGTTCGTTTT ATTTTAAAAT TGACGGAAAC CCGGTTTATA TGAAAGGAGC TAATTATATT CCATCTGATG CTTTTCTTTC AAGAGTATCT AAAAAAGAAT ATGAAAAAAT AGTTTTATCT GCCAAAGAGG CCAATATGAA TATGCTTCGC GTTTGGGGCG GCGGTATTTA TGAAGACGAT TATTTCTACG ATTTATGTGA TAAATACGGT ATAAATGTCT GGCAGGATTT TATGTTTGCA GGTACTATGG TTCCCGGAGA CGATGCTTTT TTTGAAAATG TAAAAAAAGA AGTTCAATAT CAGGTAAAAA GACTGCGTCA TCATCCAAGT ATTGTTTTAT GGTGCGGCAA CAACGAATCT GATGAAGCTT TTAAAAACTG GGGCTGGATG AAAAATTTCA AAATTTCAAA GCAGGATTCC ATTCGTTTGT GGAAAGATTA CACACGTTTA TTTCATGACA GTATTCCGAA ATGGGTAAAA GAAGTCGATG GTAAACGTCC GTATTTAAGC TCTTCACCAT TATACCATTG GTCAAAACCA AAAAGCGTAA CCGAAGGAGA CAGCCATTAT TGGGGAATCT GGTGGGGATT GGAAGATATT GAAGCCGTAC AGAAAAAAAC GGGACGATTT GTGAGCGAAT ACGGAATGCT GTCGATGCCA AATTATTCGT CTGTAGAAGT ATTTACTCTG CCTGAAGACC GATATTTATA TTCGGATATA GTATTGGCGC ATCAAAAATC TGGAAAAGGA TTTGAAAAGC TGGATTCCTA TTTAAACAGG TATTTTATCG ATTCGGCTAA AATAAAAAAC ATAAGTTTAG AAGATTATAC CTATTTAACG CAATGTCTTC AATACTATGT TGTTAAAAAT ATCGCAGGCA CACATCGTTC TAAAGAACCG TACAATATGG GAACTTTAAT CTGGCAGTTA AACGACTGCT GGCCAACAGC AAGCTGGAGT ATTACAGATT ATTATAACCG CGAACCACGA GCTTCGTGGT ATGCCATAAG AGAAGCGTAC AGAGACGATG TAAAACCAGA AACTGATTTT ATACGCCCAA GAGATTTATC TTTAGAAGAT CCAAAAATCA ACTGGGAAAT AAAAGGAAAT AACATAATTA TAAAAGCTCT GAAAATGGCA AAATACGTTT ACATCTCTAT GAAAGGATAT AATGGAAAAT GGAGCGATAA TTATTTTGAT CTAAAAGCAG GAGAAGAAAA AACAATTTCG TTTGAAGGGA AAATAACGAA GCCAGAGATT AAGATTTATT CTTTGTTTGA GGTTTTGGAA AAGTATAAAT AA
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Protein sequence | MNYQNKLHCI MSLCLAGFTS IAFAQKIELK SNWTYREEKT QKWYTASVPG EIHTDLLNSK LIPDPFYRDN EKKLQWIERK NWEYKTAFQV TANMLKKKNT ELVFDGLDTY AAVYVNNQLV LKADNMFRQW RVDVKKVLKS GNNDLRIVFQ SAQNVVDSLA KKDYPFVIPD NPRTYVRKAQ YHFGWDWGPK FTTCGIWKTP RFEAYDEKEP EKPYVLTRKI ELIQDKDSLG SSFYFKIDGN PVYMKGANYI PSDAFLSRVS KKEYEKIVLS AKEANMNMLR VWGGGIYEDD YFYDLCDKYG INVWQDFMFA GTMVPGDDAF FENVKKEVQY QVKRLRHHPS IVLWCGNNES DEAFKNWGWM KNFKISKQDS IRLWKDYTRL FHDSIPKWVK EVDGKRPYLS SSPLYHWSKP KSVTEGDSHY WGIWWGLEDI EAVQKKTGRF VSEYGMLSMP NYSSVEVFTL PEDRYLYSDI VLAHQKSGKG FEKLDSYLNR YFIDSAKIKN ISLEDYTYLT QCLQYYVVKN IAGTHRSKEP YNMGTLIWQL NDCWPTASWS ITDYYNREPR ASWYAIREAY RDDVKPETDF IRPRDLSLED PKINWEIKGN NIIIKALKMA KYVYISMKGY NGKWSDNYFD LKAGEEKTIS FEGKITKPEI KIYSLFEVLE KYK
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