| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2524 |
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| Symbol | dapD |
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| ID | 5091978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 3008393 |
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| End bp | 3009208 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644741952 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001194870 |
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| Protein GI | 146300279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.183762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTCTT TACAGACTAC AATTGAACAA GCTTGGGAAA ACAGAGCTTT ATTACAAGAA
ACAGCTACAA CTGATGCTAT TAGAGAAGTT ATCGAATTGG TTGATGCAGG AAAATTACGT
GTTGCTGAAC CAGTTGGTGA TAAATGGCAG GTAAACGAAT GGGTTAAGAA AGCGGTTGTA
ATGTATTTCC CAATTCAAAA AATGGAAACA TGGGAATCTG GTATTTTTGA ATACCACGAT
AAAATGCTCC TTAAAAGAAA TTATGCTGAG AAAGGAATTC GTGTAGTACC AAATGCTGTT
GCACGTTATG GAGCTTATAT TTCAAGCGGT GTTATTTTAA TGCCTAGTTA TGTAAACATT
GGTGCTTATG TTGATGAGGG AACTATGGTT GATACATGGG CAACTGTTGG AAGCTGTGCA
CAAATTGGTA AAAACGTACA CTTAAGCGGT GGTGTTGGAA TTGGCGGTGT TTTAGAGCCA
TTACAAGCTG CTCCGGTAAT TATTGAAGAC GGTGCTTTTA TTGGTTCTCG TTGTATTGTT
GTAGAAGGTG TTCACGTTGG TAAAGAAGCT GTTCTTGGTG CTAACGTTTG TTTAACTGCT
TCAACAAAAA TTATTGATGT TACGGGTGAC GAACCAGTTG AAATGAAAGG TTTTGTTCCT
GCACGTTCTG TTGTAATTCC AGGAAGTTAC ACTAAGAAAT TTGCTGCTGG TGAATTCCAA
GTTCCATGCG CTTTAATCAT TGGAACTCGT AAACCTTCTA CAGATTTAAA AACTTCATTA
AATAATGCAC TTCGCGAATA CGATGTTGCA GTATAG
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| Protein sequence | MNSLQTTIEQ AWENRALLQE TATTDAIREV IELVDAGKLR VAEPVGDKWQ VNEWVKKAVV
MYFPIQKMET WESGIFEYHD KMLLKRNYAE KGIRVVPNAV ARYGAYISSG VILMPSYVNI
GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQAAPVIIED GAFIGSRCIV
VEGVHVGKEA VLGANVCLTA STKIIDVTGD EPVEMKGFVP ARSVVIPGSY TKKFAAGEFQ
VPCALIIGTR KPSTDLKTSL NNALREYDVA V
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