| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2438 |
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| Symbol | |
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| ID | 5090295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2923793 |
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| End bp | 2924449 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741866 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001194784 |
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| Protein GI | 146300193 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00334229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAG AAGCCCGCGT ACAATTTGTT ATAAATACCT TAAAAGAACT CTACCCTACT
ATACCTGTTC CGCTTGACCA TAAAGATCCA TATACTTTAT TAATTGCCGT ATTGCTTTCT
GCTCAATGCA CAGATGTACG TGTGAACCAG ATTACACCTC TTTTGTTTGC AAAAGCAGAT
AACCCGTATG ACATGGTGAA GATGTCGATT GAAGAAATTA AGGAAATTAT TCGTCCGTGT
GGTTTATCGC CAATGAAATC AAAAGGAATT CATGGTTTAT CTGAAATATT AATTGAAAAA
CATAATGGAG AAGTACCGCA GAGTTTTGAA GCGCTTGAAG AATTACCAGC TGTAGGACAC
AAAACAGCAA GTGTTGTAAT GTCTCAGGCT TTTGGCGTTC CGGCATTTCC TGTAGATACA
CATATTCATA GATTGATGCA CAGATGGAAT TTGTCGAACG GAAAAAGTGT AGCTCAGACT
GAAAAAGATG CTAAACGATT ATTCCCAAGA GATTTATGGA ACGATTTGCA TTTACAGATC
ATTTGGTATG GCCGAGAATA TTCTCCTGCC CGTGGATGGA GTCTTGAAAA AGATATTATT
ACCAGAACTG TCGGCAAAAA ATCAATATTA GAAGAAGCTG CTAAAAAGAA AGTCTAG
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| Protein sequence | MNKEARVQFV INTLKELYPT IPVPLDHKDP YTLLIAVLLS AQCTDVRVNQ ITPLLFAKAD
NPYDMVKMSI EEIKEIIRPC GLSPMKSKGI HGLSEILIEK HNGEVPQSFE ALEELPAVGH
KTASVVMSQA FGVPAFPVDT HIHRLMHRWN LSNGKSVAQT EKDAKRLFPR DLWNDLHLQI
IWYGREYSPA RGWSLEKDII TRTVGKKSIL EEAAKKKV
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