| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2396 |
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| Symbol | |
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| ID | 5092128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2870198 |
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| End bp | 2870692 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644741824 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001194742 |
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| Protein GI | 146300151 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000155393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA ATCTAGAACA GTCATTTGTT GCACAATTGC AGGCAAATCA GAATATAATC
CACAAGATTT GTAGGTTGTA TACTGATGGC GAAGACGCTC ATAAAGATTT ATTTCAGGAA
ATCACCATTC AGCTCTGGAA AGCTTATCCA AAATTTAGAG GCGACAGTAA ATTTTCGACC
TGGACGTACC GTGTTGCTTT AAATACAGCA ATTACATTAT ACCGAAAAAC CAAAAGGACC
ATATCTACCG TAGATTATGA AAGTCATCAG CACTTTGTAA AAGATGTTGA TTACAATTAT
GAAGAGGAAG AACAGATAAA ATTGATGTAT AAAGCAGTTT ATCAGCTTAA TGACATCGAA
AAAGCATTAG TTTTTATGTA TTTAGAAGAC AAAGATTATC AAGAAATAGC CGAAACCTTA
GGAATCAGCG AAGTGAATGC GCGTGTGAAA ATGAATAGAA TTAAAGGGAA ACTTAAAAAA
ATACTAAATC CTTAA
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| Protein sequence | MSENLEQSFV AQLQANQNII HKICRLYTDG EDAHKDLFQE ITIQLWKAYP KFRGDSKFST
WTYRVALNTA ITLYRKTKRT ISTVDYESHQ HFVKDVDYNY EEEEQIKLMY KAVYQLNDIE
KALVFMYLED KDYQEIAETL GISEVNARVK MNRIKGKLKK ILNP
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