Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2160 |
Symbol | |
ID | 5092779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2612000 |
End bp | 2613454 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644741589 |
Product | glutamate synthase, NADH/NADPH, small subunit |
Protein accession | YP_001194507 |
Protein GI | 146299916 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAAA TAGGCGGATT TAAAGAATAT AACAGAGCCG ACGAAAGTAA TTTAGCAGTA GCAGAACGTG TTTCTAACTA CAACGAATTT ACTATTCCGG TACCAAAAGA TAAATTAAAA GAACAAGGAT CAAGATGTAT GGACTGTGGA ATTCCTTTTT GCCACAGTGG TTGTCCGTTA GGAAATTTAA TTCCTGACTT CAACGACATG GTGCATCAGG AAGAATGGCA GAGTGCATTA GAGATTTTAC AATCTACTAA TAACTTCCCT GAATTTACAG GTCGCTTATG CCCTGCTCCA TGTGAGAAAT CATGTGTATT AGGAATCATC AAAGATCCGG TTTCTATCGA AAACATCGAA AAAAGCATCG TAGAAAGAGG TTTCGCCGAA GGATGGATTA AACCACAAGC GCCAAAAACA AGAACTGGTA AAACAGTTGC TGTTATTGGT TCAGGACCTG CAGGTCTAGC AGCTGCTCAG CAATTAAACA GAGCTGGTCA CACGGTTACT GTTTTTGAAA GAGACAACGC AATTGGAGGT TTATTACGTT ACGGAATTCC AAACTTCAAA TTAGAAAAAG GAATTATCGA TCGTCGTGTA GCTATTCTTG AAGCAGAAGG AATCACTTTC AAAACTAATG TAAATGTTGG TGTTAATTTC AGTGTTGAAG AATTAAACCA ATTCGATTCT ATCGTTTTAT GCGGAGGAGC AACTGAAAGA AGAAGCTTGC CAACTAAAGG AATCGAAAGC AAAGGTGTTG TTCAGGCAAT GGATTTCTTA ACACAGCAAA CTAAAGTTTT ATACGGAGAA TCAATTCCAG ATCAGGTTAA AGCAACTGGA AAAGACGTAA TCGTTATTGG TGGTGGAGAT ACAGGTTCTG ACTGTATTGG AACTTCAAAC AGACACGGAG CAAAATCGGT AACTAATTTT GAGATTTTAC CAAAACCTCC AGTTGGAAGA AGCGAGTCAA CTCCATGGCC TTTCTGGCCG TTGCAGTTAA AAACATCTTC TTCTCACGAA GAAGGATGTG ACAGAAACTG GTTAATCAAT ACTAAAGAAT TCATTTCTAA CGATAAAGGT GAGTTAACTG GATTAAAAAC AGTTGAAGTG CAATGGAAAA TGACTCCTGG TCAGCGTCCT GAATTAATCG AAAAAGAAGG TTCTGAAAAA ATCTGGCCTT GCGATTTAGC TTTATTGGCT CTTGGATTTA CAGGTCCGGA GAAAACATTA AGCGAGCAAT TAGGAATCGA AACTGATATG AGAAGCAACT ACAAAGCGCA TAACTATCAG ACAAACGTAC CTCACATTTT CACTGCTGGT GATATGAGAA GAGGACAATC ATTAATCGTG TGGGCTATTT CAGAAGGTCG CGAAGCTGCA AGAGAAGTAG ATTTATTCCT TATGGGATCT ACAAACTTGC CTACTAAAGG AAAAGGAGAT TTACCGAGCT TATAA
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Protein sequence | MGKIGGFKEY NRADESNLAV AERVSNYNEF TIPVPKDKLK EQGSRCMDCG IPFCHSGCPL GNLIPDFNDM VHQEEWQSAL EILQSTNNFP EFTGRLCPAP CEKSCVLGII KDPVSIENIE KSIVERGFAE GWIKPQAPKT RTGKTVAVIG SGPAGLAAAQ QLNRAGHTVT VFERDNAIGG LLRYGIPNFK LEKGIIDRRV AILEAEGITF KTNVNVGVNF SVEELNQFDS IVLCGGATER RSLPTKGIES KGVVQAMDFL TQQTKVLYGE SIPDQVKATG KDVIVIGGGD TGSDCIGTSN RHGAKSVTNF EILPKPPVGR SESTPWPFWP LQLKTSSSHE EGCDRNWLIN TKEFISNDKG ELTGLKTVEV QWKMTPGQRP ELIEKEGSEK IWPCDLALLA LGFTGPEKTL SEQLGIETDM RSNYKAHNYQ TNVPHIFTAG DMRRGQSLIV WAISEGREAA REVDLFLMGS TNLPTKGKGD LPSL
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