Gene Fjoh_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2117 
Symbol 
ID5093878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2560293 
End bp2560931 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content36% 
IMG OID644741546 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001194464 
Protein GI146299873 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAG TAGGAAAAAA ATTCCCAAGT ATTGCAGTAG ATGCTATCTC AGAAATGGGT 
GACAATTTAA AAATCAACAT TTTTGAAGAA GCAGTAAACA ACAATAAAAA AGTACTTTTA
TTTTGGTACC CAAAAGATTT TACTTTTGTA TGTCCAACTG AATTACACGC CTTTCAAGCT
GCATTACCAG AATTTGAAAA AAGAAATACT ATCGTAATTG GTGCTTCTTG CGACACAAAC
GAGGTTCACT TTGCTTGGTT AAATACTCCA AAAAACAATG GTGGAATCGA AGGTGTTACT
TACCCAATCT TAGCTGATAC AAACCGTAAC TTAGCTAACA TTTTAGGTAT TCTTGATATC
GAATCTACAA GCTACAGCGA AGATACAGAT TCAGTTATCA TCGAAGGTTC AAACGTAACT
TACAGAGCTA CTTACCTAAT TGACGAAACT GGAAAAATCT TCCACGAAAG CGTAAACGAT
ATGCCACTAG GACGTAACGT AAACGAATAC TTAAGAATGG TTGATGCTTA CACTCACATC
CAAACTAAAG GAGAAGTTTG TCCTGCAAAC TGGGAAGCTG GTAAAGAAGC TATGTCTGCA
GACAGAATCA GTACTGCTGA ATACTTAAGC GCAAACTAA
 
Protein sequence
MSLVGKKFPS IAVDAISEMG DNLKINIFEE AVNNNKKVLL FWYPKDFTFV CPTELHAFQA 
ALPEFEKRNT IVIGASCDTN EVHFAWLNTP KNNGGIEGVT YPILADTNRN LANILGILDI
ESTSYSEDTD SVIIEGSNVT YRATYLIDET GKIFHESVND MPLGRNVNEY LRMVDAYTHI
QTKGEVCPAN WEAGKEAMSA DRISTAEYLS AN