Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2110 |
Symbol | |
ID | 5093871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2553603 |
End bp | 2555063 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741539 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001194457 |
Protein GI | 146299866 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.185125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAATTC TAGACAAATA CTTATTAAAA ACATTCTTAT TTACATTTAC TACGGTATTT GTAATCTTAT TTTTCATATT CATACTTCAA ACAGTATGGC TATTTATATC AGAACTAGCA GGTAAAGATC TCGACTTATT ACTGGTCGTG AAATTCCTGC TTTTTTCTAT GCCTCGTATT ATTCCGCTGG TTTTACCGCT TTCGGTTCTT TTGGCTTCGA TTATGACTTT CGGAAATTTA GCCGAAAATT ATGAATTCGC AGCCATGAAA TCTTCCGGAA TTTCGCTTCA AAGAGCCATG CGGGTTTTAA TCATTTTTAT ATTTGTTTTA AGTATAGTAG CGTTTTGGTT TGCCAATAAC GTTATTCCTT ATGCTGAATA TAAATTTGTA AACTTCCGTA AAAATATTGC TCAGGCTAAA CCTGCGATGG CAATTGCCGA AGGCCAGTTT AATGATGTTG GAACTTACAA CATTAAAGTC AATAAAAAAT CCGGTGAAAA CGGTAATATT TTAACCGGCG TTACCATTCA TGAGAAAGCA AATAACATTG GTGAAAACAA AACTGTTATT AAGGCCAAAG ACGGTGAATT AATCAGCAGT GAGAAATCGA GTATTTTGAA ACTTGTTTTA AATAACGGTT TTTACTATCA GGATGTTACT CCAAAAAAAT ACGAGGACCG CGCTAAACTT CCTTTTATAA AAGCTGCTTT CAAAAAACAC ATCATCAACA TTGATTTATC TGAATTAAAT AAAGTCGATG ACAGTAAAGA AAGTATTGAG GGCACAAATG CCATGCTAAA CGTAAACGAA TTGCGTTATA CATTAGATTC ATTGAACAAA AATCTTGACA ATGAAATCAT TTCATTCTCT GAAAATATAA ACCAGCGTGT TGGAATTAGA AAATCTATTC CTCAAAGCGA GATAGAAAAA GCCAAAAAGA AAAAAAATCT CCCAAACGAT CTTTTAACTT TATATACAAA CAAAGAGAAA TCTGATGTTT TAAAAATGGC AAGCAGTAAT GTTACGAGCA ACATTTACTC AATCGAAACG ACACAAAAAG ACTTAAAAGA CAAACAACGT GAAATCAACA AGCATTTAAC TGCATTGTAT GAAAAGTTTG TTATTGCTTT TGCTTGTTTC TTAATGTTCT TTATTGGCGC TCCATTAGGC GCTATTATTC GAAAAGGAGG ACTTGGTCTG CCAATCGTTT TTGCAGTTTT AATTTTTATT ACTTTTCATT TCATCAATAC TTTTGGAAAA AGATTATCAC AAGAAGGCGG TATGAGTCCT TTTATGGGTT CATGGATGTC TTCATTTATT CTTTCACCAT TGGCCATATT ATTAACGTAT CGTGCCACAA ATGATAACGG ATTAATTAAT TTTGATGCAA TAACCACTCC TATTTCACAA CTGTTTCAAA AAATTTATGA GCGGTTTAAA CCAGCTCAAA ACAAACAATA A
|
Protein sequence | MKILDKYLLK TFLFTFTTVF VILFFIFILQ TVWLFISELA GKDLDLLLVV KFLLFSMPRI IPLVLPLSVL LASIMTFGNL AENYEFAAMK SSGISLQRAM RVLIIFIFVL SIVAFWFANN VIPYAEYKFV NFRKNIAQAK PAMAIAEGQF NDVGTYNIKV NKKSGENGNI LTGVTIHEKA NNIGENKTVI KAKDGELISS EKSSILKLVL NNGFYYQDVT PKKYEDRAKL PFIKAAFKKH IINIDLSELN KVDDSKESIE GTNAMLNVNE LRYTLDSLNK NLDNEIISFS ENINQRVGIR KSIPQSEIEK AKKKKNLPND LLTLYTNKEK SDVLKMASSN VTSNIYSIET TQKDLKDKQR EINKHLTALY EKFVIAFACF LMFFIGAPLG AIIRKGGLGL PIVFAVLIFI TFHFINTFGK RLSQEGGMSP FMGSWMSSFI LSPLAILLTY RATNDNGLIN FDAITTPISQ LFQKIYERFK PAQNKQ
|
| |