Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2040 |
Symbol | |
ID | 5092054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2400248 |
End bp | 2401732 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644741465 |
Product | Alpha-L-fucosidase |
Protein accession | YP_001194390 |
Protein GI | 146299799 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.983344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG GGATATTTAT AATCGCATTA TTATTTTCCG TTCAAATGTT TTCGCAGGCC ATTTATGAAG ATGAGCGATA TGTACCGGAA ACAGATCCGG CAGTGTTGAA AAACTTAGAC GAGTGGCAGG GCAAAAAATT TGGTCTGTTA ATGCACTGGG GAACTTACAG CCAATGGGGA ATTGTAGAAT CTTGGTCTAT CTGTCCAGAA GATTACGGAT GGTGTGAACG TAAAAAAGGA AGCAATCCGT CTAATTATAA TGATTATATT AAAGATTACG AAGGATTAAG AAAAACATTT AATCCTGTAA AATTTAATCC GGAAAAATGG GCAAAAGCAG CTAAATATGC CGGAATGAAA TACATGGTTT TTACAACAAA ACACCATGAC GGATTTAATA TGTATGATAC TAAATATTCT GATTACAAAA TCACGAGCAA AGATGTTCCT TTTCATACCA ACCCAAAAGC AGATGTTTTA AAAGAAATTT TCAACTCGTT TAGAGGAGAA GGTATTTCAA CAGGAGCTTA TTTCTCTAAA CCAGACTGGC ATAATGAAAA CTACTGGGAT CCATACTTTC CTCCTTTCGA CAGAAACGTA AACTACGATC CGTCATTATA TCCAGAAAAA TGGCAGAAAT ATGTTGATTT CACTCACAAC CAAATCTTAG AGATCTTAAC AAACTACGGT AAAGTTGATA TTTTATGGTT AGATGGAGGA TGGGTTAGAA AAAGAGACCA GGTTAACATC AAAGAAAACT ACGACGAGAA ATTTACTGAA AACGAATCTA AAAACGGTTT CATCAAACAC AGAGTTGTAG ATCAGGATCC TAAAATGGAC GAATTAGTTG TAAAAGCGCG TCAAAAACAA CCAGGTTTAA TCGTGGTGGA TAGAGCGGTT CACGGTAAAA ACCAAAACTA TTTAACTCCA GAAGGACGTG TTCCTGCAAA AACATTGCCT TATCCTTGGG AATCTTGTAT TCCAGCCGGC GGTGGATGGT CATATTCTCC AGGAGCTGAA TACATGACAG GAAGACAAGG TATTCACATG TTGGTTGATA TTGTAGCAAA AGGCGGAAAC TTGTTATTAA ACATTGCGCC AAGTCCGGAA GGAGAATGGG ATAAAGGAGC TTACGATTTA TTACAGGCTT ATGGTGACTG GATGAAAGTA AACAGCACAG CGATTTACAA CACAAAACCA ATCGAACCTT ATAAAGAAGA AAATATTTGC TTTACACAAA ATAAAACAGG AAATGTATTT GCATTTTATT TAGCTAAAGA AGGAGAAAAT AAAATTCCTG CAGAAGTTAC TGTAAAATCG ATCAGCCCGA AAAAAGGAAC AAAAATTACG ATGTTAGGTT CTAAAACTTC TTTAAAATGG ACAAAAGAAG GAAACGGATT TAAAGTAATT ATTCCAGAAA GCTTAAGAAA TAATCTTCCT GCAAAAGAAG CGTGGACTTT AAAAATAGAA GCGATCAACA GATAA
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Protein sequence | MKRGIFIIAL LFSVQMFSQA IYEDERYVPE TDPAVLKNLD EWQGKKFGLL MHWGTYSQWG IVESWSICPE DYGWCERKKG SNPSNYNDYI KDYEGLRKTF NPVKFNPEKW AKAAKYAGMK YMVFTTKHHD GFNMYDTKYS DYKITSKDVP FHTNPKADVL KEIFNSFRGE GISTGAYFSK PDWHNENYWD PYFPPFDRNV NYDPSLYPEK WQKYVDFTHN QILEILTNYG KVDILWLDGG WVRKRDQVNI KENYDEKFTE NESKNGFIKH RVVDQDPKMD ELVVKARQKQ PGLIVVDRAV HGKNQNYLTP EGRVPAKTLP YPWESCIPAG GGWSYSPGAE YMTGRQGIHM LVDIVAKGGN LLLNIAPSPE GEWDKGAYDL LQAYGDWMKV NSTAIYNTKP IEPYKEENIC FTQNKTGNVF AFYLAKEGEN KIPAEVTVKS ISPKKGTKIT MLGSKTSLKW TKEGNGFKVI IPESLRNNLP AKEAWTLKIE AINR
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