| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2028 |
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| Symbol | |
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| ID | 5094389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 2379024 |
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| End bp | 2381138 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741453 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_001194378 |
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| Protein GI | 146299787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACC GTACGATGAA AAACATTTTT CTTTTCTTGT GTTCTCTATG TATCACAATT
TCTGCAAACA GTCAAAATAC TGTAAAAGCT CCGGAACCTT TTGGTCCGCT TCCTACACAA
AAACAAATGG ACTGGCAGGA AATGGAATTT TATGCTTTTG TACATTTTTC ATTAAATACA
TTTACCAATA AAGAATGGGG TTACGGAGAC GAATCTCCAG CTCTCTTTAA CCCGACAAAT
TTAGACGTTC GCCAATGGGC GCGTATTGTA AAAGCGGCCG GAATGAAAGG AATTATTTTG
GTAGCCAAAC ATCACGACGG ATTTTGTTTA TGGCCGTCGG CGTATACAGA ACGTTCTGTG
AAGAATTCTC CGTGGAAAAA CGGGAAAGGT GATTTGGTTA AAGAATTGGC AGAAGCCTGT
AAAGAATACG ATTTAAAATT AGGATTATAT CTTTCTCCCT GGGACAGAAA CCGTGCAGAT
TATGGCAAGC CGGAATATAT TACCTATTTC AGAAACCAGC TGAAAGAATT ATTGACCAAT
TACGGAGATG TTTTTGAAAT GTGGTTTGAC GGTGCAAACG GCGGTGACGG TTATTACGGC
GGAGCCAATG AAACAAGAAA AATCAATACA CTTGAATATT ACAATTGGGA TGAAACCTAT
AAATTAATAT ACAAAACTGC ACCAAAAACT TTGGTTTGGG GCGTTGGCCC TTCTGAAGCC
AGATGGATTG GAAATGAAGA AGGCCGTGCC GGAAAAACAA ACTGGTCACT TTTACGCCAA
AAAGATGAAT TGGCCGGAAA AGTACATTAT ACCGAATTTA TGTCGGGGCA TGAAGACGGA
GAAAAATGGG TTCCTGGCGA AGCCGATGTT TCGATCAGAC CAGGATGGTT TTATCATTCA
GTTGAAGATG ATAAAGTACG TCCGCTGGAT GAAATGGTCG ATATTTATTA CGAATCAATT
GGGCGAAATG CCACTTTATT ATTAAATCTT CCGGTTGACA GGAGAGGTTT GGTTCACGAA
AATGACGAAG CCAGATTAAA AGAATTGGTA GCGACTGTAA AAGCTGATTT TAAAACCGAA
TTATTATCTA AAACAAAAAT TACGGCTGAT AATGTTAGAG GCAGCAGCGA AACATTTGCA
GGAAAAAATG CTGTCGATGG AAATAAAAAT ACCTATTGGG CAACAGACGA CAATGTTAAA
ACGGCTTCAA TAACTTTTGA GTTTGATAAA CCAACTGATA TAAACCGAAT TTTACTTCAG
GAATATATTG CACTTGGACA GCGTGTAAAA GCTTTTAATG TTGAGGTTAA AGTTGATGGA
AACTGGAAAA CTGCTGCAAA CGAAACTACA ATTGGTTACA AAAGAATTTT AAGAATCGAC
CGGGTTAAAG CATCGGCATT AAGAATCAAT ATCACAGATT CAAAAGCAAA CATTGTTATT
TCAAATATTC AGGTTTACAA TGCACCGACT TTTGTGCGTA TGCCGGAAAT CAGCCGTGAT
AAAAACGGCG ATGTTACGAT TAAATCTCAA GATGGAAATC CTGTTTATTA TTCGCTTGAC
GGAAAAAATC CAACGAAAAA AAGCACCTTA TATAAAGGAG TATTTCGAGT TAAGAAAGCG
GTTACCATAA AAGCTGTAGC AATTGATGCT GTAGAAAATA TTAGCAGCGC AGTAAAAACA
GCAAAATACG GCGCATCAAA AGAAAACTGG AAAATAGTTT CGGCTTCAAG CGGAGATTTA
AAATCAGCTG ATCGTGTTAT CGACGGAAAT CCAGATACAG ATTGGAGTTT TGGCAATGAT
CAAAACAAAC TTCCACAGGA AATAATTATA GATATGGGAA GCCTTTTAAA CTTAAACGGA
TTTACTTATA TACCGCAGCA AGTAGGAAAC AATCTTAATT TAATTTCAAA TTATGAATTC
TACACAAGCA CTGATAATAT AAACTGGACA TTGCAGTCTG AAGGTGAATT TTCGAATATT
AAACACAACC CAATCGAACA GATTAAGACT TTCAAAAAAG CCAAAGCCAG ATATATTCGT
TTCGTTGCCA AGTCAGCAGT GGCAAAGGGA TCGACTGTTT CTATTGCAGA ATTAAATGTT
ATCGAAACAT TATAA
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| Protein sequence | MNHRTMKNIF LFLCSLCITI SANSQNTVKA PEPFGPLPTQ KQMDWQEMEF YAFVHFSLNT
FTNKEWGYGD ESPALFNPTN LDVRQWARIV KAAGMKGIIL VAKHHDGFCL WPSAYTERSV
KNSPWKNGKG DLVKELAEAC KEYDLKLGLY LSPWDRNRAD YGKPEYITYF RNQLKELLTN
YGDVFEMWFD GANGGDGYYG GANETRKINT LEYYNWDETY KLIYKTAPKT LVWGVGPSEA
RWIGNEEGRA GKTNWSLLRQ KDELAGKVHY TEFMSGHEDG EKWVPGEADV SIRPGWFYHS
VEDDKVRPLD EMVDIYYESI GRNATLLLNL PVDRRGLVHE NDEARLKELV ATVKADFKTE
LLSKTKITAD NVRGSSETFA GKNAVDGNKN TYWATDDNVK TASITFEFDK PTDINRILLQ
EYIALGQRVK AFNVEVKVDG NWKTAANETT IGYKRILRID RVKASALRIN ITDSKANIVI
SNIQVYNAPT FVRMPEISRD KNGDVTIKSQ DGNPVYYSLD GKNPTKKSTL YKGVFRVKKA
VTIKAVAIDA VENISSAVKT AKYGASKENW KIVSASSGDL KSADRVIDGN PDTDWSFGND
QNKLPQEIII DMGSLLNLNG FTYIPQQVGN NLNLISNYEF YTSTDNINWT LQSEGEFSNI
KHNPIEQIKT FKKAKARYIR FVAKSAVAKG STVSIAELNV IETL
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