| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2001 |
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| Symbol | |
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| ID | 5094363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 2336501 |
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| End bp | 2337826 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741427 |
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| Product | xylose isomerase |
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| Protein accession | YP_001194352 |
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| Protein GI | 146299761 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTTT TAGGAGATAA AGAATACTAC AAAGGTATCG GCCAAATTAA ATTTGAAGGA
AAAGAATCTG ATAATCCGCT GGCATTTAAA TATTATAATC CAGACCAAAT TGTAGCTGGA
AAAACAATGC GTGAGCACTT TAAATTTGCT ATCGCATATT GGCATACATT CTGCGGACAA
GGAAGCGACC CATTTGGACC AGGAACACAG CAATTTGCTT GGGATGCTTC GTCAGATCCA
TATCAGGCTG CAAAAGATAA AGCAGATGCA GCTTTTGAAT TTATCAGCAA AATGGGATTC
GATTATTTCT GTTTCCACGA TTACGATTTG ATCGCTGAAG GAGCAACTTT TGCAGAATCA
GAAAAACGTT TGGCTTTTAT TACAGATTAC TTAAAACAGA AAAAAGCAGA ATCTGGAATT
AAATTACTTT GGGGAACTTC AAACTGTTTC TCAAACCCAA GATTCATGAA CGGAGCAGCT
ACAAATCCAG ATTTTAATGT AGTAGCAAGA GCTGGTGGAC AAGTAAAATT AGCTTTGGAC
GCAACTATCG CTTTAGGCGG AGAAAACTAT GTATTCTGGG GTGGTAGAGA AGGTTATATG
TCTTTACTAA ACACAGATAT GGGAAGAGAA TTAGACCACA TGGCACAATT CTTAGCAATG
TCTAGAGACT ACGCAAGAGC TCAAGGTTTT AAAGGAACTT TCTTTATTGA GCCAAAACCA
ATGGAACCAT CAAAACACCA ATACGATTTT GACTCGGCTA CAGCAATTGG ATTCTTGAAA
AATTATGGTT TAGACAAAGA TTTCAAAATC AATATCGAAG TAAACCACGC TACTTTGGCA
CAGCATACTT TCCAACACGA ATTAGAAGTA GCTGCAAAAG CAGGAATGTT AGGAAGCATC
GATGCAAATA GAGGAGATTA CCAAAACGGA TGGGATACAG ATCAATTCCC AAATAATATC
CAAGAAACTA CTGAAGCGAT GTTGGTTTTC TTAAAAGCCG GCGGATTGCA AGGTGGTGGA
GTTAACTTTG ATGCTAAAAT CAGAAGAAAT TCAACTGATT TAGAAGATGT TTTCTTAGCG
CACATTGGCG GAGCTGATAC TTTTGCAAGA GCTTTATTGA CTGCAGACAA AATCATCACT
TCTTCTCCTT ACGAAAAATT AAGAAAAGAA AGATACAGCT CATTCGATTC TGGAAAAGGG
AAAGATTTTG CTGATGGAAA ATTAAGCCTT AAAGATCTTT ATACTATCGC TCACGAAAAC
GGAGAATTAA ATCTTCAAAG CGGTAAGCAA GAATTGTTTG AAAACATCAT CAACCAATAT
ATTTAA
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| Protein sequence | MIVLGDKEYY KGIGQIKFEG KESDNPLAFK YYNPDQIVAG KTMREHFKFA IAYWHTFCGQ
GSDPFGPGTQ QFAWDASSDP YQAAKDKADA AFEFISKMGF DYFCFHDYDL IAEGATFAES
EKRLAFITDY LKQKKAESGI KLLWGTSNCF SNPRFMNGAA TNPDFNVVAR AGGQVKLALD
ATIALGGENY VFWGGREGYM SLLNTDMGRE LDHMAQFLAM SRDYARAQGF KGTFFIEPKP
MEPSKHQYDF DSATAIGFLK NYGLDKDFKI NIEVNHATLA QHTFQHELEV AAKAGMLGSI
DANRGDYQNG WDTDQFPNNI QETTEAMLVF LKAGGLQGGG VNFDAKIRRN STDLEDVFLA
HIGGADTFAR ALLTADKIIT SSPYEKLRKE RYSSFDSGKG KDFADGKLSL KDLYTIAHEN
GELNLQSGKQ ELFENIINQY I
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