Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1934 |
Symbol | |
ID | 5091670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2237136 |
End bp | 2238029 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644741351 |
Product | phage integrase family protein |
Protein accession | YP_001194285 |
Protein GI | 146299694 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA ATAAGCAGGC ATTTCAGGAT TATTTACAGT TTGAGAAAAA ATATTCTCCT CATACTGTAA ATGCTTATTT AAATGATTTG GGTTTTTTTG AAGAGTTTAA TAAAGAGCGT TTTGAGCAGG ATTCTATTGA GAGAGTAAAT TATAGTCAAA TCAGGAGCTG GATTGTTTTT TTGGTAGATC AAGGAGTTTC GAATGTTTCT GTAAATCGTA AAATGGCGTC TTTAAAAGCG TTTTATAAAT TCCTTTTAAA AATAAAGCAG ATAGAGGTAA GTCCAATGCT TAAACATAAG GCGCTCAAGA CTCCTAAAAT TGTCCAGATT CCGTTTTCAG AAAAAGAAGT AAGTGATTTG ATGTTTGGAG TTGAGTCTCC AATTGGCTTT GAGGAGGTTA GGGATAAGCT TATTGTGGAT TTGTTTTATA CTACAGGAAT GCGTCGGGCA GAATTGATAG GTTTAATGTT GAAAAATGTT GATTTGTCTT CGGGTGTTGT GAAGGTTTTG GGTAAAAGGA GTAAAGAGCG TATTGTGCCG CTTCTGCCGA TAGTTGCGGA TCAAATTAAT TTATATATAA AAGAAAGAGA GCAGCTTGAT CAGATTGTGG ATTCTGAATA TTTTTTTATT TCGAAAAAAG GGTTAAAATT AAGCGAATCT TTTGTGTATC GATTAATAAA TTGTTACTTT AGTAGGGTCT CTGAAAAGGT AAAGAAGAGT CCGCATGTGC TTCGGCATAC TTTTGCGACT CACTTGCTGA ATAATGGGGC AGATTTAAAT TCAGTTAAGG AATTATTAGG GCATTCGAGT TTGGCGTCTA CGCAGGTTTA TACTCATAAT AGTTTAGCAG AGTTAAAAAA AGTATATTCA GAAGCGCATC CGAGAAATAA ATAA
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Protein sequence | MKSNKQAFQD YLQFEKKYSP HTVNAYLNDL GFFEEFNKER FEQDSIERVN YSQIRSWIVF LVDQGVSNVS VNRKMASLKA FYKFLLKIKQ IEVSPMLKHK ALKTPKIVQI PFSEKEVSDL MFGVESPIGF EEVRDKLIVD LFYTTGMRRA ELIGLMLKNV DLSSGVVKVL GKRSKERIVP LLPIVADQIN LYIKEREQLD QIVDSEYFFI SKKGLKLSES FVYRLINCYF SRVSEKVKKS PHVLRHTFAT HLLNNGADLN SVKELLGHSS LASTQVYTHN SLAELKKVYS EAHPRNK
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