| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1753 |
|---|
| Symbol | |
|---|
| ID | 5093095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 2026317 |
|---|
| End bp | 2027942 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644741164 |
|---|
| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
|---|
| Protein accession | YP_001194104 |
|---|
| Protein GI | 146299513 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG GATTCTTTCA TGTACCAAAA GCGGTAAACG AGCCTGTAAA GAGCTACGCA
CCGAACTCAC CAGAAAAAGC AGCTGTTCAG GCAGCTTACA CTACAATGTG GAACTCTCAA
ATTGATGTTC CGTTATATAT TGGAAGTGAA GAAATCAAAA CTGGAAACAC AAAAAATATT
ACAGCTCCTC ATGATCACAA ACACGTAGTT GGAAAGTATC ATTTAGCTGA AAAACAACAT
ATTGAAAAAG CAATTGCCAA TGCTCTTGAA GCAAGACAAA AATGGGCAAA TATGGCATGG
GAACAGCGTG CTGCTATTTT CTTAAAAGCT GCTGAACTTA TCGCTGGTCC ATACAGAGCT
CGTATTAACG CTGCTACAAT GATTGGACAG TCTAAAAATA TTCACCAGGC AGAAATCGAT
TCTTCTTGCG AGTTAATCGA CTTTTTGCGT TACAATGTTG AGTTTATGAC TCAAATCTAC
AACGATCAGC CAAAATCAGA TTCTACTGTT TGGAACCGTG TAGAATACAG ACCGCTTGAA
GGTTTTGTTT ACGCTATTAC TCCTTTTAAC TTTACTGCTA TCGCTGCTAA TCTTCCTGCA
AGTGCTGCTA TGATGGGTAA CGTTGTGGTT TGGAAACCAA GTGACAGTCA GGTATTTTCT
GCAAAAATTA TTATTGATGT TTTCAAAGAA GCGGGAGTTC CAGACGGAGT TATCAACGTA
GTTTTTGGAG ATGCTTTAAT GATTACAGAT ACTGTATTGG CAAGCCGTGA TTTTGCTGGT
ATTCACTTTA CAGGATCTAC TCACGTATTT AAAGATATCT GGTCTAAAAT TGGAGCAAAT
ATCCACAACT ATAAAACATA CCCAAGAATC GTTGGAGAAA CTGGTGGTAA AGATTTTATC
ATTGCTCACC CAAGCGCAAA CGTAAAACAA GTTGCTACAG GTATTACTCG CGGTGCTTTT
GAATACCAAG GTCAAAAATG TTCTGCAGCT TCTAGAGCTT ATATTCCTCA AAGTTTATGG
CCGGCTGTAA AAGAGCAGTT AATTGCTGAT GTAAAATCTA TGAAAATGGG TTCTCCGGAA
GATTTCGGAA ACTTTATTAC AGCAGTTATC CACGAAGGTT CTTTTGATAA ATTAGCCAGC
TATATCGATC AGGCTAAAAA AGATGCTGAT GCTGAAATCA TTGTTGGAGG AAACTACGAT
AAATCTGTTG GATACTTTAT TGAGCCAACG GTTATTGTAA CTACAAACCC TAAATATACT
ACAATGGAAA CTGAGTTATT TGGACCAGTT ATCACTATTT ATGTTTACGA AGATGCAAAA
TGGGAAGAAA CTTTAGAATT AGTTGATACT ACTTCTGAGT ACGCTTTAAC AGGAGCTGTT
TTCAGCCAGG ATCGTTATGC TGTTGAAGTG GCTACAACAA AATTACAAAA CGCTGCTGGT
AACTTCTACA TTAATGACAA ACCAACCGGA GCAGTTGTAG GTATGCAGCC ATTTGGTGGA
GCAAGAGCTT CTGGAACTAA TGACAAAGCA GGTTCTGCAT TGAACTTATT GCGTTGGGCT
TCTCCAAGAA CTATTAAAGA AACTTTTGTA ACTCCAGAAG ATTACAGATA TCCGTTTTTA
GGATAA
|
|---|
| Protein sequence | MLKGFFHVPK AVNEPVKSYA PNSPEKAAVQ AAYTTMWNSQ IDVPLYIGSE EIKTGNTKNI
TAPHDHKHVV GKYHLAEKQH IEKAIANALE ARQKWANMAW EQRAAIFLKA AELIAGPYRA
RINAATMIGQ SKNIHQAEID SSCELIDFLR YNVEFMTQIY NDQPKSDSTV WNRVEYRPLE
GFVYAITPFN FTAIAANLPA SAAMMGNVVV WKPSDSQVFS AKIIIDVFKE AGVPDGVINV
VFGDALMITD TVLASRDFAG IHFTGSTHVF KDIWSKIGAN IHNYKTYPRI VGETGGKDFI
IAHPSANVKQ VATGITRGAF EYQGQKCSAA SRAYIPQSLW PAVKEQLIAD VKSMKMGSPE
DFGNFITAVI HEGSFDKLAS YIDQAKKDAD AEIIVGGNYD KSVGYFIEPT VIVTTNPKYT
TMETELFGPV ITIYVYEDAK WEETLELVDT TSEYALTGAV FSQDRYAVEV ATTKLQNAAG
NFYINDKPTG AVVGMQPFGG ARASGTNDKA GSALNLLRWA SPRTIKETFV TPEDYRYPFL
G
|
|---|
| |