| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1629 |
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| Symbol | nusA |
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| ID | 5090980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1880058 |
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| End bp | 1881311 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644741038 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001193980 |
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| Protein GI | 146299389 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATT TAGCATTAAT CGATTCATTC TCAGAGTTTA AAGATAATAA ACTTATTGAT
CGTGTAACGC TTATGGCAAT TTTGGAGGAC GTGTTTAGAA ATGCACTAAA GAAAAAATAC
GGTTCTGATG ATAATTTCGA TATCATTATA AATCCTGATA AAGGAGATAT GGAGATTTGG
AGAAGAAGAG TTATCGTTGC TGATGAAGAT CTGGACTTTG AGAACGAAGA AATTACTTTG
ACTGAAGCAA GGATGATCGA GGCGGATTTT GAAATTGGTG AGGAAGTTTC TGAAGAGGTT
AAATTAATTG ACTTAGGAAG AAGAGCTATT TTGGCTTTGC GTCAAAACTT AATATCTAAA
ATTCACGAAC ACGATAATAC AAATCTTTAT AAACAATTTA AAGATATTAT TGGTGATATT
TATACTGCCG AAGTGCACCA CGTTCGCCCA AGAGTTGTTA TCTTAGTAGA CGATGAAGGG
AATGAGATTG TGCTTCCAAA AGAAAAACAA ATTCCTTCTG ACTTTTTCCG TAAAGGAGAT
AATGTACGCG GAATTATTGA AAGCGTTGAA TTAAAAGGGA ACAAACCTCA AATTATTATG
TCTAGAACTT CTGAGAAGTT TTTAGAAAAA TTATTCGAGC AGGAAATTCC AGAAGTATTC
GACGGCTTAA TTACAGTTAA AAATGTAGTT CGTATTCCGG GAGAAAAAGC AAAAGTTGCT
GTAGATTCGT ATGATGACAG AATTGATCCT GTTGGAGCCT GCGTAGGTAT GAAGGGATCT
CGTATTCATG GAATTGTACG TGAGTTAGGA AATGAAAATA TTGATGTAAT CAATTATACA
AACAATATTC AATTGTTCAT TACAAGAGCA TTAAGCCCTG CAAAAGTTTC TTCAATCAAA
ATAGATGAAG AAAGTAAAAG AGCTGAAGTT TTCTTGAAAT TAGAAGAAGT TTCTAAAGCA
ATTGGTAGAG GCGGACATAA TATTAAATTA GCGGGTCAAT TAACAGGGTA TGAGCTGGAT
GTTATTCGTG AAGGAGATGT TGCTGGTACA GTTGCAGATG AAGACGATGT TGAATTGACA
GAGTTTTCAG ATGAAATCGA AGAATGGGTA ATTGAAGAGT TTGCTAAAAT AGGTTTAGAT
ACTGCAAAAA GTATCTTGAA ACACGACGTA GAAGATTTAG TAAGAAGAAC AGACTTAGAA
GAGGAAACAA TTCTAGATGT TATGAAAATA CTAAAAGAAG AGTTTGATAG TTAA
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| Protein sequence | MENLALIDSF SEFKDNKLID RVTLMAILED VFRNALKKKY GSDDNFDIII NPDKGDMEIW
RRRVIVADED LDFENEEITL TEARMIEADF EIGEEVSEEV KLIDLGRRAI LALRQNLISK
IHEHDNTNLY KQFKDIIGDI YTAEVHHVRP RVVILVDDEG NEIVLPKEKQ IPSDFFRKGD
NVRGIIESVE LKGNKPQIIM SRTSEKFLEK LFEQEIPEVF DGLITVKNVV RIPGEKAKVA
VDSYDDRIDP VGACVGMKGS RIHGIVRELG NENIDVINYT NNIQLFITRA LSPAKVSSIK
IDEESKRAEV FLKLEEVSKA IGRGGHNIKL AGQLTGYELD VIREGDVAGT VADEDDVELT
EFSDEIEEWV IEEFAKIGLD TAKSILKHDV EDLVRRTDLE EETILDVMKI LKEEFDS
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