Gene Fjoh_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1592 
Symbol 
ID5090943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1842753 
End bp1843907 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content33% 
IMG OID644740999 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001193943 
Protein GI146299352 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTT CTGAAAGTAG AAATACAACT CGTTGGGTTA TAATTTTCAT ATCCTTTTTA 
ATCATTTCGC TGATTCTCTG GAATACTTAT ACATTTTTCC AAATTTTTAA GAATGAGGAA
CGTTTAAAAA TGAAGCTTTT TGTAAATGCC CAAATTACAA TTGTAAATGC TGACGAAAAT
ACAGACATTG AACTTCCTCT TCAAATTATT AACAATAATA CCTCTATTCC CGGTATAGTA
ATATTGTATG ATAAGGTGGT AAGTGCCACA AATGTCCCAG AAGAGATCTT GACGAACAAG
AAAAAAAGAG CCAATTATTT GAGAAAATTA GGTAATGAAA ATGAACCTAT TACTTTTGAA
TATGCTCCGG GAAAATATCA AACGCTTTAT TATGGAAATT CAGCTTTACT TAATAAACTC
AAATATTATC CTGTAGCTTT ATTACTGATT ATCTTTTTGT GTGCTGCTTT GATTTACAAT
TTTTACAAAA GCACAAAAAT GGCAACGCAA AATAAACTGC TGGCGGGAAT GGCAAAAGAA
ACAGCTCATC AAATTGGAAC GCCTTTATCA TCTTTAATCG GCTGGGTTGA GATTTTAAAA
ACCGAAGCGA TTGATCAATC CATAACTATT GAAATTGAAA AAGATGTGGA ACGCCTGCAG
ACAATAACGG ATCGTTTTTC TAAAATTGGT TCTGTTCCTG TTTTAGAACC GCACGATATT
GTAGCCGAAA CTTTAAATAC GTACGAATAT TTACAATCAC GTTTTTCTAA ACAGGTCACT
TTTTCTTATC AGGTTCCTGA AAAACCAATT TTTGCTTTAA TCAATCCAAC ACTTCACAGC
TGGACGATCG AAAACCTTGT TAAAAATGCT ATTGATGCCA TGAAAGGAAA AGGAACTTTA
GATCTTTATA TTGAAAAAGA TGCTCATCAT ATAAAAATTA ACGTGAAAGA TTCTGGAAGC
GGTATTGCAA AAAACCAATT CAAAACTATT TTTGAACCCG GTTTTACTAC AAAAAAACGC
GGCTGGGGAT TAGGTCTTTC TTTAACCAAA AGAATTGTTG AGGAATATCA CAATGGAAAG
ATTAAAGTTC TTAATTCTGA AATTGGAAAA GGAACTACGT TTCAGATTAC TTATGAAACT
ACCAGTCCGG CTTAA
 
Protein sequence
MRFSESRNTT RWVIIFISFL IISLILWNTY TFFQIFKNEE RLKMKLFVNA QITIVNADEN 
TDIELPLQII NNNTSIPGIV ILYDKVVSAT NVPEEILTNK KKRANYLRKL GNENEPITFE
YAPGKYQTLY YGNSALLNKL KYYPVALLLI IFLCAALIYN FYKSTKMATQ NKLLAGMAKE
TAHQIGTPLS SLIGWVEILK TEAIDQSITI EIEKDVERLQ TITDRFSKIG SVPVLEPHDI
VAETLNTYEY LQSRFSKQVT FSYQVPEKPI FALINPTLHS WTIENLVKNA IDAMKGKGTL
DLYIEKDAHH IKINVKDSGS GIAKNQFKTI FEPGFTTKKR GWGLGLSLTK RIVEEYHNGK
IKVLNSEIGK GTTFQITYET TSPA