| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1490 |
|---|
| Symbol | |
|---|
| ID | 5091236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 1712701 |
|---|
| End bp | 1715547 |
|---|
| Gene Length | 2847 bp |
|---|
| Protein Length | 948 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644740897 |
|---|
| Product | TonB-dependent receptor, plug |
|---|
| Protein accession | YP_001193841 |
|---|
| Protein GI | 146299250 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ATGTACTAAT CGTTTTGGGT CTTGTGACAT TTTCAGGCCT TTATGCTCAG
GACAATAAAA CCGAGCAGGA TTCTTTGAAG AATAATGAAT TGTCAGAAGT AACCATAATT
GGATCAAGAA GTAAGAACAG AGTAAAAACA GATGTGCCGG TTCCGGTTGA TGTTTTTAAT
ATTGCCGATA TTACAAAAGG AGCGCCGCAA ACCAGCGTAA CTCAAATTTT AAATTATGTT
GCGCCGTCGT TTACAAGTAA CGCAACATCA ACTGCCGATG CAACAGATCA CGTTGATCCG
GCACAATTAA GAGGTTTAGG ACCAGATCAG GTTTTAATTT TAGTAAACGG AAAACGAAGA
CATACCAGCG CATTGGTAAA CATAAACGGA TCGCCGGGAA GAGGATCTGT AGGAACTGAT
TTAAATGCCA TTCCATCTTT TGCTATTGAA AGAATCGAAG TTTTGAGAGA CGGTGCGGCT
GCACAATATG GTTCAGATGC TATTGCAGGA GTTATCAATA TCGTATTAAA GAAAAATGCC
AACTATATTT CTGGAGGAGT TCAGTATGGA GCTAACTTGT CATCAGGTTC AAATAACTTT
AAAGGAGGAT CAGATGGACA AACAACCCAG ATTGATTTAA ATTACGGAAC TTCTTTAGGA
AAACCCGGAA GTTATTTAAA CCTAACTGCT GTTGGTGTAA CAAGACAGGC AACAAGCAGA
GCAGGAATTA GAAATAACGG AATTTTTAAT GCTTATAATG CTGTAGAAAA CAGAGCGGCT
CAAAATGGAG TCGAAATCAA TTCATTGTTC AGTAATATTA ATGCGACTGG AAATTCGGCA
CAAATTATAA GTTCGCTGCA GCAATATGCG CCGCAGGTAA GTTATTTTAC AACAGCACAG
CAAAATGCAA TTGCATCGGC AACAACAATT GCTCAAATGC AGACAGCGCT TAATTTTGAT
GTTACTAATA ATGAGTTAGC TTACAGAGGA CAGCAAAGAG CAGATTATAA TATGAGTGTG
GGTCAGTCAG AATTGGCTTC GGGACAGGCA TATTATAATG CAAAATATCC TTTAACCGAA
ACAACTTCAC TATATTCATT TGGAGGAATC TCTTATAGAA ACGGGAAATC GTATGCTTTT
AACAGACTGC CAAACGGTTC AGGAACTTTC ACGCAAGTGT ATCAAAACGG ATTTTTACCG
GAAATTGAAT CTAAAATTTT AGATGCTTCA GCTGCACTTG GGGTTACAAC AAATATTTTA
GGCTTCGATA CAGATTTAAG CACCAATTTA GGAACCAATT CATTTAATTA TGATGTAAAC
AATACTATCA ATGCTACTTT AGGAACCAAT TCACCTTTGA GTTTCGATGC TGGAAAAGTT
TCATTTTTAC AAAGCACAAC CAATTTAGAT TTCAGTAAAA AGCTTGATGT TCTTTCTGGA
TTAAATGTTG CTTTTGGAGG AGAATTTAGA TATGAAAATT ACCAAATTAA AGCAGGAGAA
GAAGCTTCAT ACGGATTATA TGATGTAAAC GGAGCTTTGG TAACCGGAAT TTTACCAAGT
ACTTCACCTT TAATTGTTAC TGATTTCTTT GGCAACAAAC GTGGAGCGGG AGCGCAGGGA
TTCTCAGGAT TTCAGCCTTC AGATGCTAAA GAAAAAGACA GACAAAGCGG TGCTGCCTAC
ATTGATTTAG AGTTGAATGC AACCGAAAAA TGGCTGGTAA ACGGAGCGGC ACGTTATGAA
AACTATTCAG ATTTTGGAAG TACAGTTACT TTTAAATTAG CTTCTCTTTT AAAATTAACA
GATAATATCA ATTGGAGAGT TTCAGGACAG ACAGGTTTTA GAGCGCCATC ATTACAGCAA
AAATATTTTG AAAGCAGTTC TACACAATTC ATTAATGGGG CGCCTTATCA GGTTGGATAT
TTTACAAATG ATTCTCAGGC CGCAAAAAGT ATTGGTGTAG AAAATTTAAA ACCAGAAAAA
TCAAAAAGCA TCAGTACAGG ATTTACATTT AAAATTCCGG AAGCAAACAT TACAATTTCT
ACAGATGCTT ATTATACAAG AATCAACGAC AGAATTGTTT TATCAGGACA ATATGCAAGA
CCAACAGATG CACAGATAAA TGCTGCAACA TCGCAGACAC AAAAAGATGC TTTGACATTG
TTTCAACAGG CATTTGATTT AAAAGGTGTT GAGAGAGCTT CATTCTGGAC AAACGGAATT
GACTCAGAAA CAAAAGGAGT TGATTTAGTA ATTTCTCAAA AATATGATGT AATTCAGGAT
TTTGTAATCA GAAACGATTT TGCTTTAAGT TTTAATGAAA CAAAAAGAGT AGGCGCTTTA
AATGTACCAC AGTCTATTAT TGATGCAGGA GGCGATCCTT ATATATATTC ATTTTTTCCT
GAGTCAAGCC GAATTTATTT AGAAGAAGCA ATTCCGAAAT TAAAAGCAAA CCTAACAACG
ACTTTCAGTA TCAAAAAACT GGATATATAT TTAAGGAACA GCTATTTTGG AAAAGTAACA
GATCCGGGAG CAACAGATGT TAATTTAGAT GGATTTTCTT CTGTTTACGA ACATCCGGAA
TACAGTGCAA AACTAGTAAC CGATTTATCT TTTGGATACC AGATAAACGA ACATTTTAGA
GCGACTGTTG GATTTAATAA TATAGGAGAT GTTTATCCGG ACAGAAATAA TCCTTCGACT
CCGGCTTTCA CAAACACAAC TCCAACTTTA TCTCCGGCGC CAAGTACAGA CTTAACAAAC
GCAAATCAGT TTGCATATTC AAGAGCTGTA TCGCAATTTG GATTAAACGG AAGATTTGGA
TTTGCACGTT TAAGCTTTAA ATTTTAA
|
|---|
| Protein sequence | MKKNVLIVLG LVTFSGLYAQ DNKTEQDSLK NNELSEVTII GSRSKNRVKT DVPVPVDVFN
IADITKGAPQ TSVTQILNYV APSFTSNATS TADATDHVDP AQLRGLGPDQ VLILVNGKRR
HTSALVNING SPGRGSVGTD LNAIPSFAIE RIEVLRDGAA AQYGSDAIAG VINIVLKKNA
NYISGGVQYG ANLSSGSNNF KGGSDGQTTQ IDLNYGTSLG KPGSYLNLTA VGVTRQATSR
AGIRNNGIFN AYNAVENRAA QNGVEINSLF SNINATGNSA QIISSLQQYA PQVSYFTTAQ
QNAIASATTI AQMQTALNFD VTNNELAYRG QQRADYNMSV GQSELASGQA YYNAKYPLTE
TTSLYSFGGI SYRNGKSYAF NRLPNGSGTF TQVYQNGFLP EIESKILDAS AALGVTTNIL
GFDTDLSTNL GTNSFNYDVN NTINATLGTN SPLSFDAGKV SFLQSTTNLD FSKKLDVLSG
LNVAFGGEFR YENYQIKAGE EASYGLYDVN GALVTGILPS TSPLIVTDFF GNKRGAGAQG
FSGFQPSDAK EKDRQSGAAY IDLELNATEK WLVNGAARYE NYSDFGSTVT FKLASLLKLT
DNINWRVSGQ TGFRAPSLQQ KYFESSSTQF INGAPYQVGY FTNDSQAAKS IGVENLKPEK
SKSISTGFTF KIPEANITIS TDAYYTRIND RIVLSGQYAR PTDAQINAAT SQTQKDALTL
FQQAFDLKGV ERASFWTNGI DSETKGVDLV ISQKYDVIQD FVIRNDFALS FNETKRVGAL
NVPQSIIDAG GDPYIYSFFP ESSRIYLEEA IPKLKANLTT TFSIKKLDIY LRNSYFGKVT
DPGATDVNLD GFSSVYEHPE YSAKLVTDLS FGYQINEHFR ATVGFNNIGD VYPDRNNPST
PAFTNTTPTL SPAPSTDLTN ANQFAYSRAV SQFGLNGRFG FARLSFKF
|
|---|
| |