| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1433 |
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| Symbol | |
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| ID | 5092439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1643317 |
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| End bp | 1644180 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644740840 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001193784 |
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| Protein GI | 146299193 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAAC TTAAAATCAC CAAGCAGGTA ACCAATCGTG AAACTGCATC GTTAGATAAA
TATCTACAAG AAATCGGAAA AGTTGACCTA ATTACCGCTG ATGAAGAGGT AGAATTAGCA
CAAAGAATAA AGGCTGGTGA TCAAAGAGCT TTAGAAAAAT TAACAAAAGC CAACCTACGT
TTCGTTGTAT CGGTTGCTAA ACAATATCAA AACCAAGGAT TAACTCTTCC TGATTTAATT
AATGAAGGAA ACTTAGGGCT TATCAAAGCA GCACAGCGTT TTGATGAAAC TCGTGGTTTT
AAATTCATTT CTTATGCCGT ATGGTGGATT CGTCAATCGA TTCTTCAGGC TCTTGCAGAA
CAATCACGTA TTGTACGTTT ACCATTAAAC AAAATTGGTT CTATCAATAA AATCAACAAA
ATGTATGCAT TATTAGAGCA GTCTAATGAG CGTCCGCCTT CTGCTGAAGA AATTGCAAAA
GAACTTGACA TGACTGTAAA TGACGTAAAA GAGTCTATGA AAAACTCTGG TCGTCACTTA
TCAATGGATG CACCTCTTGT TGAAGGTGAA GATTCTAACC TTTACGACGT ATTACGTTCT
GGAGAATCTC CAAACCCAGA CAGAGAGTTA ATTCACGAAT CATTACGTAC TGAAATCGAA
CGTTCATTAG AAACATTAAC GCCAAGAGAG GCAGATGTTG TTCGTTTGTA TTTTGGACTT
GGCGATCAGC ACCCAATGAC TTTAGAAGAA ATTGGAGAAA CTTTCGACTT AACTCGTGAG
CGTGTTCGTC AGATTAAAGA AAAAGCAATC CGTAGATTAA AACATACTTC TAGAAGTAAA
ATTCTTAAAA CTTATCTTGG TTAA
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| Protein sequence | MRQLKITKQV TNRETASLDK YLQEIGKVDL ITADEEVELA QRIKAGDQRA LEKLTKANLR
FVVSVAKQYQ NQGLTLPDLI NEGNLGLIKA AQRFDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN KIGSINKINK MYALLEQSNE RPPSAEEIAK ELDMTVNDVK ESMKNSGRHL
SMDAPLVEGE DSNLYDVLRS GESPNPDREL IHESLRTEIE RSLETLTPRE ADVVRLYFGL
GDQHPMTLEE IGETFDLTRE RVRQIKEKAI RRLKHTSRSK ILKTYLG
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