Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1420 |
Symbol | |
ID | 5093203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1629141 |
End bp | 1630817 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644740827 |
Product | amino acid/peptide transporter |
Protein accession | YP_001193771 |
Protein GI | 146299180 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAAA CTCAAGTAAA AACTGCGCAT CCAAAAGGTC TTTGGGTACT ATTCGGAACG GAGATGTGGG AGCGATTCAA TTTTTATGGA ATGCGCGCTT TATTAACTTT ATTTCTTGTG AATTCATTAT TGATGAAGGA AGAAGAAGCG TCTCTAATTT ATGGAGGTTT CCTTGGACTT TGTTATTTAA CACCAATGCT GGGTGGTTTT GTTGCTGACC GTTATTTAGG AAACAGAAAT TGTATTCTAT TAGGCGGATT ATTAATGGCA ATAGGACAAA TGCTTTTGTT TACCAGCGGA AGCGTTTTTG AGTCAAATTT AGATCTGGCA AAAATCATTA TGTACTCTGC ATTAGGAGTA ATTGTTTTTG GAAACGGATT CTTTAAACCA AACATTTCTA GTATGGTTGG AAGTTTGTAT CCAAAACAAG AAAAAACAAA ATTAGATAGT GCTTTCACTA TTTTCTATAT GGGGATTAAC ATTGGGGCAT TCTTAGGTCA GTCTATTTGT CCTTTATTAG GAGATGTTAA AGATGCAGGC GGTATTAGAG ATATCCACGC TTTTAGATGG GGATTCATGG CGGCTTCTGC AGCAATGTTG TTAGGTACAA TTCTTTTTTA CTTCTTAAAA AATAAATATG TAGTTTCTCC AGAAGGAAAA CCGCTAGGAG GACTTCCTTC AAAAAATGAT GCTTCAGATT TTGAAGAAGG AGAATCACAA AAAGCAAACT TTTCTAATAA AGCTCTTGCT ATGGCAGGAG TAGCATTTAT TGCTTTAGGG TTCTTTTTTC ACTATGTGGT AGGTCAAAAC TTAATTTATA CTTTGATTTA CTCAAGTGGT CTTGCATTGG CAGGATTGAT TATTTCTGAT ACTTCTTTGA CTAAAGTAGA AAGAGACAGA ATTATTGTAA TTTACATTGT ATCGTTCTTT ATTATCTTCT TCTGGGCGGC GTTTGAGCAG GCAGGTTCAT CTTTGACTTT TATTGCTGAT AACCAAACAG ACAGACATTT CTTTGGCTGG GCAATGCCGC CATCGATGGT TCAAATTTTT AACGGTATGT TTGTTGTGTT TTTAGCAGTT CCATTTAGTG TTCTTTGGGA TACTTTAAGA GCTAAAGGCA AAGAGCCAAT CTCACCTGTA AAATTAGCTG CTGGGTTAGT GATAATTTCT GTGAGTTTCT TTATGATTGC GACTCAGGTT TCTTATATCG GAACTTCAGG ACTTTTATTA GTAAAATGGC TTATCTTATT ATATTTCCTA AATACATGTG CTGAGTTATG TTTGTCTCCA ATTGGTTTGT CGTTGGTGGG TAAATTGTCA CCAAAACGTT TTGCATCATT GTTATACGGA GTATTCTTTT TGTCTAATGC ATCAGGTTAT GCTTTAGGAG GAACTTTAGG TTCTATCTTG CCTGCAACCG GAGATAAATT TGCAAAAGCA AAAGAACTTG GAATAGATCT TCAGGCAGTT TTAGATAAAA AAATCACATT GACAGCAGAT CAGTTGTCTT TATTAGATCA TCATCAAATT AGTGCTCAAA ACCCAATTTT TGCAGGATTT GAAATCCATA ATTTATATGA GTTCTTTATG GTTTTTGTTG TTCTGACAGG TATTGCGGCA ATTTTATTAT TTGCTTTAAC ACCACTATTG AAAAAATTAA TGCACGGTGT TAGATAA
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Protein sequence | MGETQVKTAH PKGLWVLFGT EMWERFNFYG MRALLTLFLV NSLLMKEEEA SLIYGGFLGL CYLTPMLGGF VADRYLGNRN CILLGGLLMA IGQMLLFTSG SVFESNLDLA KIIMYSALGV IVFGNGFFKP NISSMVGSLY PKQEKTKLDS AFTIFYMGIN IGAFLGQSIC PLLGDVKDAG GIRDIHAFRW GFMAASAAML LGTILFYFLK NKYVVSPEGK PLGGLPSKND ASDFEEGESQ KANFSNKALA MAGVAFIALG FFFHYVVGQN LIYTLIYSSG LALAGLIISD TSLTKVERDR IIVIYIVSFF IIFFWAAFEQ AGSSLTFIAD NQTDRHFFGW AMPPSMVQIF NGMFVVFLAV PFSVLWDTLR AKGKEPISPV KLAAGLVIIS VSFFMIATQV SYIGTSGLLL VKWLILLYFL NTCAELCLSP IGLSLVGKLS PKRFASLLYG VFFLSNASGY ALGGTLGSIL PATGDKFAKA KELGIDLQAV LDKKITLTAD QLSLLDHHQI SAQNPIFAGF EIHNLYEFFM VFVVLTGIAA ILLFALTPLL KKLMHGVR
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