| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1245 |
|---|
| Symbol | |
|---|
| ID | 5090045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1418573 |
|---|
| End bp | 1419121 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644740647 |
|---|
| Product | NADH dehydrogenase subunit B |
|---|
| Protein accession | YP_001193596 |
|---|
| Protein GI | 146299005 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT CAAAAGTAAA TATGGTGTCT CCTCCAGAAG GTCTTACTGG TGAAGGATTC
TTCGCTACAA AACTTAATGA TGTTGTAGGT TTGGCACGCG CGAATTCTCT TTGGCCTTTA
CCATTTGCAA CTTCTTGCTG CGGAATTGAG TTTATGGCAA CAATGGCAGC ACATTACGAT
TTAGCACGAT TTGGTTCTGA GCGTGTGAGT TTCTCTCCTC GTCAGGCAGA CATGCTGCTG
GTAATGGGAA CCATTTCTAA AAAAATGGCG CCAATTTTAA GACAAGTTTA CGAACAAATG
TCTGAGCCAC GCTGGGTAAT TGCTGTAGGA GCTTGCGCTT CTTCAGGTGG TGTTTTCGAC
ACTTACTCAG TTTTACAAGG AATTGATAAA GTTATTCCGG TTGACGTTTA CGTTCCAGGA
TGCCCTCCTA GACCAGAGCA GATTGTTGAC GGTGTAATGA GACTGCAAGA ATTGGTAAAA
AGCGAATCTG TTAGACGCAG AAGTTCACCA GAATACCAGG AATTATTAGC TTCCTATAAC
ATTTCATAA
|
|---|
| Protein sequence | MSDSKVNMVS PPEGLTGEGF FATKLNDVVG LARANSLWPL PFATSCCGIE FMATMAAHYD
LARFGSERVS FSPRQADMLL VMGTISKKMA PILRQVYEQM SEPRWVIAVG ACASSGGVFD
TYSVLQGIDK VIPVDVYVPG CPPRPEQIVD GVMRLQELVK SESVRRRSSP EYQELLASYN
IS
|
|---|
| |