Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1189 |
Symbol | |
ID | 5089734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1344533 |
End bp | 1349572 |
Gene Length | 5040 bp |
Protein Length | 1679 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644740591 |
Product | regulator of chromosome condensation, RCC1 |
Protein accession | YP_001193540 |
Protein GI | 146298949 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA CTTTACTTTT AATTTTAATC TTTTCTTTCA TACAAATAAA GGCACAATGC TGGAAAACAG CAGCTGCCGG ATACAGTCAT ACTGTTGCTG TAAGAAATGA CGGCACTTTA TGGACCTGGG GAAATAATGA TGAGGGACAA CTAGGCAACA GTACGCCTGC AGCAATAAAT ATTCCCACAA AAATGGGAAC TGCCAATAAC TGGAAAACAG CAGCAGCAGG CTGGGGACAT ACTGTAGCAC TTAAAACTGA CGGAACATTA TGGGCATGGG GATATGGTCG TTTAGGACAG TTAGGAAACG GTAATTATAA TACTAATTTT AATCTTCCTC AACAAATAGG AACAGAAAAT GACTGGCAGA CAATAGCCGC TGGGCATGGT CATACAGTCG CCTTAAAAAA CGACGGCACT TTATGGGCCT GGGGGAATAA TTTTTCTGGA CAATTGGGTA ATGGAACTTC TTTTGACAGA AACACTCCAA CGAAAATAGG ATCTGATTCT AACTGGCTGG CTATTTCCGC AGGTGGGCTT TATACAATTG CACTGAAAAA AGACGGAACT TTATGGGCTT GGGGGAAAAA TACTTATGGC ACATTGGGAG ACGGCACTAC AACAAATAAT CGTGTACCAA AACAAATAGG AACAGATACT GATTGGAAAA CAATAGCCGC AGGAAGTGAT CATACTATTG CTATAAAAAA TGATGGCAGT TTATGGATCT GGGGAAAAAA TACTTATGGC GCATTAGGAG ATAATACCAC AATAGATAAA ATTGTTCCAA CAAAAATTGG AACAGATACA GATTGGAAAT CTGCAGAAGG CGGTGTAGAT TATACTGTTG CTATAAAAAC AGACGGTACT TTGTGGGCAT GGGGCTATAA TGCTGACGGA GTATTTGGGA ATGGTTCAAA AATTAACAGT TTAATCCCTG TACAAATAGG AACAGAAAAA AACTGGCAAA TGGTTAGTGG CGGTTCAGTT CATACAGTTG CTGTAAAAAC AGATGAAAGT TTATGGTCTT GGGGAAATAA TTCTTATGGT CAATTAGGTG ATGGTACATC TATTGAAAAA AATATTCCTA CACTTTTAAA TTGTGCAGGT TCATTGATAG TAACTGTATC TCAAACCAAT GTACGTTGTG CTGGCAGTAA TGAAGGCTCC GCTTCAATAA CATCAGTTTC GGGCGGAACA ACGCCATATA CTTATCTTTG GTCTAATGGA AAAACAACTG CTTCGATTAC AGAATTGGCT GCAGGTGATT ATTCTTGTAC TATAACAGAT GCTTCTTCAC TATCCATTAC AAAAAACATT ACTATTACAC AGCCGCCAGC ACTTTTTTCT ACTGTAACAG TTATTAATAC AAATTGTAAC AACAATAATG GCAGCATTGA AATTATTGCA AATGGAGGAA CATTACCATA TCAGTACGAA ATTTGGTCAA ATGCAATTTA CCAAGATTCT AATGTTTTTA CCGGCCTGCC ATCAGGAAAT TATCAAGTAA TAGTAAAGGA CAGTAAGGGA TGTTTAGTAA GCTCCTATGT AGTTATTGAA AAAGAAAGTA CTCCTATTCC AACCGTAAGT GCACAAACGC TGAGTGCTTC TGCAACTGTT GCTGATTTAA AAGCTACCGG CAGTAATCTA AAATGGTTTA CAACACTTAC AGGAGGAAAT GCTTTAGCGT CATCTGTTTC ACTGCAAACA GGTAAATATT ATGTTTCTCA AACAATTAAC GGGTGCGAAA GTGTAAGAGC TGCTGTTGAT ATAACTATTC TACCTGCATC ATATGGAGAA ATACCAACAA ATGGTTTGGT TGCTTATTAC ACATTTAATG GAAATGCAAA TGATACAAGC GGAAATGGAT TTAATGGAAA TGCTGTAAGT ACAAATCTGG CATCTGACCG ATTTGGAAAC AGCAATAGCG CCTATAGTTT TAATGGAGCC GGCAGTTATA TTGATGCTCC TATTGCCAAT ATTCCTCAAG GCAATGCTGC AAGAACAATT TCTGGCTGGT TTAAAACAAA TACTCCAAAT CCAGGTGAAA ATGGAGATGT ATGTATTTTT AATTATGGCG CGTTATCAAG ATTACAAAGA TTTGGACTTA CTGTTTATTC AAAAGGTTAT CTTGAAACTT CAACCGGACC AAATGCCATA GGCGATGATT TTTATGTAAA CAACTTTAAT TACTTAAGTA ATGACTGGTA TTTTTTTACA CTTACCTATA ACGGAACCAA AGTATCTTTA TATGTAAATG GTGTATTTGT TTCAGAAAAA AATGCTGCCT TAAATACTAC GAACAATCTT TTTAGAATAG GAAAACGAAT TTCAGGAGAT ACAACTAATG AGTATTTTAA AGGACAAATC GATGATATTG GTATCTGGAA TCGTGTTTTG ACTCCGGAAG AAATTGCGGC TATGTATACC CCTGGTGAGC AGCCTGCTTA TACTTTAATT CCAGATCCGA GTTTTGAACA AAAATTGATC AATTTAGGAA TTGATTCCGG AGTTGTAGAT GGAAAAGTCC GTACTTCAGA TATCGCTTCA GTGGAATCTC TTGATGTGTC TTCTTCTTCT ATTTCAGATT TAACTGGAAT ACAAGACTTC ATATCATTAA CTAATTTGAA TTGTGGTCAA AATAATCTGA AAGCATTAAA CGTAAGTAAT AATACTGCTT TGACAGTTTT AGATTGTAAT AACAACCAGA TTGCATACTT AGATGTAAGC AATAATCTCG CCTTAACTGA CTTAGCTTGC TACTCAAATA AATTAACCTC TTTGGATGTT AAAAAAAATA CAGCTTTAAC AAAATTAGAT TCTGGTTCAA ACCAATATAC TTCATTGGAT GTAAGCCATA ATACAGCTTT AACATTTTTG GGATGTAATA CCAGCCAATT AACTACTATA GATGTAAGCA ATAATACCGC TTTAAAACTT CTGGATTGCC GTGAAAATAA AATCACCTCC TTGGATGTTT CTAAAATAAC TACATTAACA GAGTTGTATT GTCAGTCTAA TGAATTAAAA GATTTAGATA TAAGTAAAAA CAAAGTTTTA GAATTTTTAA ATTGTTCAAA AAATCAACTA ACCACTTTGG ATATTAGCAC AAATACTGCC TTAGTTGGTT TATTCCCTAA TTATAATCAA TTAATAAATC TAAATTTAAA GAATGGAAAC AATGATAAAC TTATATATCT AAATTTTAAA AACAACCCTA ATTTAACTTG TATTCAGGTT GATGATGTGG CCTTTGCTAA TGCAAACTGG ACAGATAAAA AAGATGCCGG CGCTGCGTTT AATGTTAAAT GCGATAATTA TACTTTAATT CCAGATGTTA ATTTTGAAAA CAGGCTGATC GCTTTGGGTT ATGATTCTGG TAGTGCAGAT GGAAAAGTAC TTACTGCTAA TATTTCAAAC ATTACAAGCT TGAATGTGTC TTCAAAAAGT ATTTCTGATT TAAGCGGGAT ACAAGATTTT AAATCTCTTA CTACTTTAAA TTGTGCAAAA AATAATCTTA CATCATTAAA TCTTTCAAAT AATAAAAATC TTAAAACTTT ATATTGTGAA CAAAATCAGC TGACTGCTTT AGATCTTAGT AATAATGTTA GTTTGATAAC AGTAGAATGC AGTTACAATA AATTGCAAAA TGTAAACATT TCAAAAAATC TGGTTTTAAA GAATTTATAC TGCATAAATA ACCAGTTAAC AAATATTGAT GTAACTAATA ACACTGCATT AGAACAATTC TATTGTTTTG GCAACCAGCT AACTTCATTA AATGTTAGTA AAAATTTAAA CTTACTTGGA TTAGAATGCG GATTGAACAA ATTAACAACT CTTGATGTAT CGAACAATAC TTTAATGTAT TATTTAGAGT GTTATTCTAA TCAATTAACT AGTCTTAATG TTACTAAAAA TATTGCATTA TTCCATCTTA ACTTTTTTAA TAATCAGTTA ACTTCGATAG ACTTATCTAA TAATCCTCTT TTAAAAGAAT TGTATTGTTT AAACAATCAG CTCACAAGTC TTGACCTATC AAAAAATAAT GCACTTACTA ATTTAGACTG TAAAAACAAT AAGCTGACAG CATTAAATTT AAAAAATGGA AATAACACAT TATTAGCAAC TATTGATTTA AATTTTACGC AAAATCCTGA TTTAACTTGT ATTCAGGTTG ACAATGCTGC ATATTCTAAT ACAAATTGGC CGGCAGCAAA AGATGCTGCA GCATCTTTCA GTGAAAACTG TGGTTCTATT TCAATTCCAG ATTCAAATTT TGAACAAAAA TTAGTTGATT TAGGAATAGA TACTGATGGT TTAAACGGAA AAATTACGAT TGCAGATGCA AGTGCTGTGA CTATTTTAAA TCTTTCAAAC AGTAATATTA AAGATCTAAC TGGGATTGAA TATTTTACCT CTTTAACTTA TTTAGATGTA AGCAATAATC AATTGACAAC TTTAGATGTA AGTAAAAATA TTCTATTAGA AACATTAAAT GCTTCTTCAA ATCAGCTTAC TATATTAGAT TTATCTAAAA ATACTAAACT TAGAATTGTG TATGTAGTTA ATAATCCTTT GGTTTCATTA AATCTGCGAA ACGGAAACAA TACAAACTTT ATTCTGCCGC CAAATACCGG AAAAAAATCA GTTTCTGGAT TGTACACTTC CTTTTTAGGG CTTAAAACTC TGGGTTGTAT TCAGGTTGAT GATGAAAGTT ATTCAAATGC AAATTGGTCA AATATCAAAG AATCGACTAC AACTTATTCT AATACTTGTA AGACACTGGG TGTTCCTGAA TCTGCTCTTA AAAATGTTGT TATACATCCT AACCCAACCA AAGGAGAATT ACATATTCAA AATGTAAACC TTGAAAAAGC AAACGTTTAT AATGTTTTAG GACAGCTTGT AAAATCATTT ACATTAAATT CAAATAATAC AGATAACACA ATCAATTTAT CTGGATTGCC AAAAGGAGTT TACTATGTGT ATTTAATCAA TCAGGATGCC GCTTCGGCTA AAAAAGTGAT TGTAGAATAA
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Protein sequence | MRKTLLLILI FSFIQIKAQC WKTAAAGYSH TVAVRNDGTL WTWGNNDEGQ LGNSTPAAIN IPTKMGTANN WKTAAAGWGH TVALKTDGTL WAWGYGRLGQ LGNGNYNTNF NLPQQIGTEN DWQTIAAGHG HTVALKNDGT LWAWGNNFSG QLGNGTSFDR NTPTKIGSDS NWLAISAGGL YTIALKKDGT LWAWGKNTYG TLGDGTTTNN RVPKQIGTDT DWKTIAAGSD HTIAIKNDGS LWIWGKNTYG ALGDNTTIDK IVPTKIGTDT DWKSAEGGVD YTVAIKTDGT LWAWGYNADG VFGNGSKINS LIPVQIGTEK NWQMVSGGSV HTVAVKTDES LWSWGNNSYG QLGDGTSIEK NIPTLLNCAG SLIVTVSQTN VRCAGSNEGS ASITSVSGGT TPYTYLWSNG KTTASITELA AGDYSCTITD ASSLSITKNI TITQPPALFS TVTVINTNCN NNNGSIEIIA NGGTLPYQYE IWSNAIYQDS NVFTGLPSGN YQVIVKDSKG CLVSSYVVIE KESTPIPTVS AQTLSASATV ADLKATGSNL KWFTTLTGGN ALASSVSLQT GKYYVSQTIN GCESVRAAVD ITILPASYGE IPTNGLVAYY TFNGNANDTS GNGFNGNAVS TNLASDRFGN SNSAYSFNGA GSYIDAPIAN IPQGNAARTI SGWFKTNTPN PGENGDVCIF NYGALSRLQR FGLTVYSKGY LETSTGPNAI GDDFYVNNFN YLSNDWYFFT LTYNGTKVSL YVNGVFVSEK NAALNTTNNL FRIGKRISGD TTNEYFKGQI DDIGIWNRVL TPEEIAAMYT PGEQPAYTLI PDPSFEQKLI NLGIDSGVVD GKVRTSDIAS VESLDVSSSS ISDLTGIQDF ISLTNLNCGQ NNLKALNVSN NTALTVLDCN NNQIAYLDVS NNLALTDLAC YSNKLTSLDV KKNTALTKLD SGSNQYTSLD VSHNTALTFL GCNTSQLTTI DVSNNTALKL LDCRENKITS LDVSKITTLT ELYCQSNELK DLDISKNKVL EFLNCSKNQL TTLDISTNTA LVGLFPNYNQ LINLNLKNGN NDKLIYLNFK NNPNLTCIQV DDVAFANANW TDKKDAGAAF NVKCDNYTLI PDVNFENRLI ALGYDSGSAD GKVLTANISN ITSLNVSSKS ISDLSGIQDF KSLTTLNCAK NNLTSLNLSN NKNLKTLYCE QNQLTALDLS NNVSLITVEC SYNKLQNVNI SKNLVLKNLY CINNQLTNID VTNNTALEQF YCFGNQLTSL NVSKNLNLLG LECGLNKLTT LDVSNNTLMY YLECYSNQLT SLNVTKNIAL FHLNFFNNQL TSIDLSNNPL LKELYCLNNQ LTSLDLSKNN ALTNLDCKNN KLTALNLKNG NNTLLATIDL NFTQNPDLTC IQVDNAAYSN TNWPAAKDAA ASFSENCGSI SIPDSNFEQK LVDLGIDTDG LNGKITIADA SAVTILNLSN SNIKDLTGIE YFTSLTYLDV SNNQLTTLDV SKNILLETLN ASSNQLTILD LSKNTKLRIV YVVNNPLVSL NLRNGNNTNF ILPPNTGKKS VSGLYTSFLG LKTLGCIQVD DESYSNANWS NIKESTTTYS NTCKTLGVPE SALKNVVIHP NPTKGELHIQ NVNLEKANVY NVLGQLVKSF TLNSNNTDNT INLSGLPKGV YYVYLINQDA ASAKKVIVE
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