Gene Fjoh_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1189 
Symbol 
ID5089734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1344533 
End bp1349572 
Gene Length5040 bp 
Protein Length1679 aa 
Translation table11 
GC content33% 
IMG OID644740591 
Productregulator of chromosome condensation, RCC1 
Protein accessionYP_001193540 
Protein GI146298949 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA CTTTACTTTT AATTTTAATC TTTTCTTTCA TACAAATAAA GGCACAATGC 
TGGAAAACAG CAGCTGCCGG ATACAGTCAT ACTGTTGCTG TAAGAAATGA CGGCACTTTA
TGGACCTGGG GAAATAATGA TGAGGGACAA CTAGGCAACA GTACGCCTGC AGCAATAAAT
ATTCCCACAA AAATGGGAAC TGCCAATAAC TGGAAAACAG CAGCAGCAGG CTGGGGACAT
ACTGTAGCAC TTAAAACTGA CGGAACATTA TGGGCATGGG GATATGGTCG TTTAGGACAG
TTAGGAAACG GTAATTATAA TACTAATTTT AATCTTCCTC AACAAATAGG AACAGAAAAT
GACTGGCAGA CAATAGCCGC TGGGCATGGT CATACAGTCG CCTTAAAAAA CGACGGCACT
TTATGGGCCT GGGGGAATAA TTTTTCTGGA CAATTGGGTA ATGGAACTTC TTTTGACAGA
AACACTCCAA CGAAAATAGG ATCTGATTCT AACTGGCTGG CTATTTCCGC AGGTGGGCTT
TATACAATTG CACTGAAAAA AGACGGAACT TTATGGGCTT GGGGGAAAAA TACTTATGGC
ACATTGGGAG ACGGCACTAC AACAAATAAT CGTGTACCAA AACAAATAGG AACAGATACT
GATTGGAAAA CAATAGCCGC AGGAAGTGAT CATACTATTG CTATAAAAAA TGATGGCAGT
TTATGGATCT GGGGAAAAAA TACTTATGGC GCATTAGGAG ATAATACCAC AATAGATAAA
ATTGTTCCAA CAAAAATTGG AACAGATACA GATTGGAAAT CTGCAGAAGG CGGTGTAGAT
TATACTGTTG CTATAAAAAC AGACGGTACT TTGTGGGCAT GGGGCTATAA TGCTGACGGA
GTATTTGGGA ATGGTTCAAA AATTAACAGT TTAATCCCTG TACAAATAGG AACAGAAAAA
AACTGGCAAA TGGTTAGTGG CGGTTCAGTT CATACAGTTG CTGTAAAAAC AGATGAAAGT
TTATGGTCTT GGGGAAATAA TTCTTATGGT CAATTAGGTG ATGGTACATC TATTGAAAAA
AATATTCCTA CACTTTTAAA TTGTGCAGGT TCATTGATAG TAACTGTATC TCAAACCAAT
GTACGTTGTG CTGGCAGTAA TGAAGGCTCC GCTTCAATAA CATCAGTTTC GGGCGGAACA
ACGCCATATA CTTATCTTTG GTCTAATGGA AAAACAACTG CTTCGATTAC AGAATTGGCT
GCAGGTGATT ATTCTTGTAC TATAACAGAT GCTTCTTCAC TATCCATTAC AAAAAACATT
ACTATTACAC AGCCGCCAGC ACTTTTTTCT ACTGTAACAG TTATTAATAC AAATTGTAAC
AACAATAATG GCAGCATTGA AATTATTGCA AATGGAGGAA CATTACCATA TCAGTACGAA
ATTTGGTCAA ATGCAATTTA CCAAGATTCT AATGTTTTTA CCGGCCTGCC ATCAGGAAAT
TATCAAGTAA TAGTAAAGGA CAGTAAGGGA TGTTTAGTAA GCTCCTATGT AGTTATTGAA
AAAGAAAGTA CTCCTATTCC AACCGTAAGT GCACAAACGC TGAGTGCTTC TGCAACTGTT
GCTGATTTAA AAGCTACCGG CAGTAATCTA AAATGGTTTA CAACACTTAC AGGAGGAAAT
GCTTTAGCGT CATCTGTTTC ACTGCAAACA GGTAAATATT ATGTTTCTCA AACAATTAAC
GGGTGCGAAA GTGTAAGAGC TGCTGTTGAT ATAACTATTC TACCTGCATC ATATGGAGAA
ATACCAACAA ATGGTTTGGT TGCTTATTAC ACATTTAATG GAAATGCAAA TGATACAAGC
GGAAATGGAT TTAATGGAAA TGCTGTAAGT ACAAATCTGG CATCTGACCG ATTTGGAAAC
AGCAATAGCG CCTATAGTTT TAATGGAGCC GGCAGTTATA TTGATGCTCC TATTGCCAAT
ATTCCTCAAG GCAATGCTGC AAGAACAATT TCTGGCTGGT TTAAAACAAA TACTCCAAAT
CCAGGTGAAA ATGGAGATGT ATGTATTTTT AATTATGGCG CGTTATCAAG ATTACAAAGA
TTTGGACTTA CTGTTTATTC AAAAGGTTAT CTTGAAACTT CAACCGGACC AAATGCCATA
GGCGATGATT TTTATGTAAA CAACTTTAAT TACTTAAGTA ATGACTGGTA TTTTTTTACA
CTTACCTATA ACGGAACCAA AGTATCTTTA TATGTAAATG GTGTATTTGT TTCAGAAAAA
AATGCTGCCT TAAATACTAC GAACAATCTT TTTAGAATAG GAAAACGAAT TTCAGGAGAT
ACAACTAATG AGTATTTTAA AGGACAAATC GATGATATTG GTATCTGGAA TCGTGTTTTG
ACTCCGGAAG AAATTGCGGC TATGTATACC CCTGGTGAGC AGCCTGCTTA TACTTTAATT
CCAGATCCGA GTTTTGAACA AAAATTGATC AATTTAGGAA TTGATTCCGG AGTTGTAGAT
GGAAAAGTCC GTACTTCAGA TATCGCTTCA GTGGAATCTC TTGATGTGTC TTCTTCTTCT
ATTTCAGATT TAACTGGAAT ACAAGACTTC ATATCATTAA CTAATTTGAA TTGTGGTCAA
AATAATCTGA AAGCATTAAA CGTAAGTAAT AATACTGCTT TGACAGTTTT AGATTGTAAT
AACAACCAGA TTGCATACTT AGATGTAAGC AATAATCTCG CCTTAACTGA CTTAGCTTGC
TACTCAAATA AATTAACCTC TTTGGATGTT AAAAAAAATA CAGCTTTAAC AAAATTAGAT
TCTGGTTCAA ACCAATATAC TTCATTGGAT GTAAGCCATA ATACAGCTTT AACATTTTTG
GGATGTAATA CCAGCCAATT AACTACTATA GATGTAAGCA ATAATACCGC TTTAAAACTT
CTGGATTGCC GTGAAAATAA AATCACCTCC TTGGATGTTT CTAAAATAAC TACATTAACA
GAGTTGTATT GTCAGTCTAA TGAATTAAAA GATTTAGATA TAAGTAAAAA CAAAGTTTTA
GAATTTTTAA ATTGTTCAAA AAATCAACTA ACCACTTTGG ATATTAGCAC AAATACTGCC
TTAGTTGGTT TATTCCCTAA TTATAATCAA TTAATAAATC TAAATTTAAA GAATGGAAAC
AATGATAAAC TTATATATCT AAATTTTAAA AACAACCCTA ATTTAACTTG TATTCAGGTT
GATGATGTGG CCTTTGCTAA TGCAAACTGG ACAGATAAAA AAGATGCCGG CGCTGCGTTT
AATGTTAAAT GCGATAATTA TACTTTAATT CCAGATGTTA ATTTTGAAAA CAGGCTGATC
GCTTTGGGTT ATGATTCTGG TAGTGCAGAT GGAAAAGTAC TTACTGCTAA TATTTCAAAC
ATTACAAGCT TGAATGTGTC TTCAAAAAGT ATTTCTGATT TAAGCGGGAT ACAAGATTTT
AAATCTCTTA CTACTTTAAA TTGTGCAAAA AATAATCTTA CATCATTAAA TCTTTCAAAT
AATAAAAATC TTAAAACTTT ATATTGTGAA CAAAATCAGC TGACTGCTTT AGATCTTAGT
AATAATGTTA GTTTGATAAC AGTAGAATGC AGTTACAATA AATTGCAAAA TGTAAACATT
TCAAAAAATC TGGTTTTAAA GAATTTATAC TGCATAAATA ACCAGTTAAC AAATATTGAT
GTAACTAATA ACACTGCATT AGAACAATTC TATTGTTTTG GCAACCAGCT AACTTCATTA
AATGTTAGTA AAAATTTAAA CTTACTTGGA TTAGAATGCG GATTGAACAA ATTAACAACT
CTTGATGTAT CGAACAATAC TTTAATGTAT TATTTAGAGT GTTATTCTAA TCAATTAACT
AGTCTTAATG TTACTAAAAA TATTGCATTA TTCCATCTTA ACTTTTTTAA TAATCAGTTA
ACTTCGATAG ACTTATCTAA TAATCCTCTT TTAAAAGAAT TGTATTGTTT AAACAATCAG
CTCACAAGTC TTGACCTATC AAAAAATAAT GCACTTACTA ATTTAGACTG TAAAAACAAT
AAGCTGACAG CATTAAATTT AAAAAATGGA AATAACACAT TATTAGCAAC TATTGATTTA
AATTTTACGC AAAATCCTGA TTTAACTTGT ATTCAGGTTG ACAATGCTGC ATATTCTAAT
ACAAATTGGC CGGCAGCAAA AGATGCTGCA GCATCTTTCA GTGAAAACTG TGGTTCTATT
TCAATTCCAG ATTCAAATTT TGAACAAAAA TTAGTTGATT TAGGAATAGA TACTGATGGT
TTAAACGGAA AAATTACGAT TGCAGATGCA AGTGCTGTGA CTATTTTAAA TCTTTCAAAC
AGTAATATTA AAGATCTAAC TGGGATTGAA TATTTTACCT CTTTAACTTA TTTAGATGTA
AGCAATAATC AATTGACAAC TTTAGATGTA AGTAAAAATA TTCTATTAGA AACATTAAAT
GCTTCTTCAA ATCAGCTTAC TATATTAGAT TTATCTAAAA ATACTAAACT TAGAATTGTG
TATGTAGTTA ATAATCCTTT GGTTTCATTA AATCTGCGAA ACGGAAACAA TACAAACTTT
ATTCTGCCGC CAAATACCGG AAAAAAATCA GTTTCTGGAT TGTACACTTC CTTTTTAGGG
CTTAAAACTC TGGGTTGTAT TCAGGTTGAT GATGAAAGTT ATTCAAATGC AAATTGGTCA
AATATCAAAG AATCGACTAC AACTTATTCT AATACTTGTA AGACACTGGG TGTTCCTGAA
TCTGCTCTTA AAAATGTTGT TATACATCCT AACCCAACCA AAGGAGAATT ACATATTCAA
AATGTAAACC TTGAAAAAGC AAACGTTTAT AATGTTTTAG GACAGCTTGT AAAATCATTT
ACATTAAATT CAAATAATAC AGATAACACA ATCAATTTAT CTGGATTGCC AAAAGGAGTT
TACTATGTGT ATTTAATCAA TCAGGATGCC GCTTCGGCTA AAAAAGTGAT TGTAGAATAA
 
Protein sequence
MRKTLLLILI FSFIQIKAQC WKTAAAGYSH TVAVRNDGTL WTWGNNDEGQ LGNSTPAAIN 
IPTKMGTANN WKTAAAGWGH TVALKTDGTL WAWGYGRLGQ LGNGNYNTNF NLPQQIGTEN
DWQTIAAGHG HTVALKNDGT LWAWGNNFSG QLGNGTSFDR NTPTKIGSDS NWLAISAGGL
YTIALKKDGT LWAWGKNTYG TLGDGTTTNN RVPKQIGTDT DWKTIAAGSD HTIAIKNDGS
LWIWGKNTYG ALGDNTTIDK IVPTKIGTDT DWKSAEGGVD YTVAIKTDGT LWAWGYNADG
VFGNGSKINS LIPVQIGTEK NWQMVSGGSV HTVAVKTDES LWSWGNNSYG QLGDGTSIEK
NIPTLLNCAG SLIVTVSQTN VRCAGSNEGS ASITSVSGGT TPYTYLWSNG KTTASITELA
AGDYSCTITD ASSLSITKNI TITQPPALFS TVTVINTNCN NNNGSIEIIA NGGTLPYQYE
IWSNAIYQDS NVFTGLPSGN YQVIVKDSKG CLVSSYVVIE KESTPIPTVS AQTLSASATV
ADLKATGSNL KWFTTLTGGN ALASSVSLQT GKYYVSQTIN GCESVRAAVD ITILPASYGE
IPTNGLVAYY TFNGNANDTS GNGFNGNAVS TNLASDRFGN SNSAYSFNGA GSYIDAPIAN
IPQGNAARTI SGWFKTNTPN PGENGDVCIF NYGALSRLQR FGLTVYSKGY LETSTGPNAI
GDDFYVNNFN YLSNDWYFFT LTYNGTKVSL YVNGVFVSEK NAALNTTNNL FRIGKRISGD
TTNEYFKGQI DDIGIWNRVL TPEEIAAMYT PGEQPAYTLI PDPSFEQKLI NLGIDSGVVD
GKVRTSDIAS VESLDVSSSS ISDLTGIQDF ISLTNLNCGQ NNLKALNVSN NTALTVLDCN
NNQIAYLDVS NNLALTDLAC YSNKLTSLDV KKNTALTKLD SGSNQYTSLD VSHNTALTFL
GCNTSQLTTI DVSNNTALKL LDCRENKITS LDVSKITTLT ELYCQSNELK DLDISKNKVL
EFLNCSKNQL TTLDISTNTA LVGLFPNYNQ LINLNLKNGN NDKLIYLNFK NNPNLTCIQV
DDVAFANANW TDKKDAGAAF NVKCDNYTLI PDVNFENRLI ALGYDSGSAD GKVLTANISN
ITSLNVSSKS ISDLSGIQDF KSLTTLNCAK NNLTSLNLSN NKNLKTLYCE QNQLTALDLS
NNVSLITVEC SYNKLQNVNI SKNLVLKNLY CINNQLTNID VTNNTALEQF YCFGNQLTSL
NVSKNLNLLG LECGLNKLTT LDVSNNTLMY YLECYSNQLT SLNVTKNIAL FHLNFFNNQL
TSIDLSNNPL LKELYCLNNQ LTSLDLSKNN ALTNLDCKNN KLTALNLKNG NNTLLATIDL
NFTQNPDLTC IQVDNAAYSN TNWPAAKDAA ASFSENCGSI SIPDSNFEQK LVDLGIDTDG
LNGKITIADA SAVTILNLSN SNIKDLTGIE YFTSLTYLDV SNNQLTTLDV SKNILLETLN
ASSNQLTILD LSKNTKLRIV YVVNNPLVSL NLRNGNNTNF ILPPNTGKKS VSGLYTSFLG
LKTLGCIQVD DESYSNANWS NIKESTTTYS NTCKTLGVPE SALKNVVIHP NPTKGELHIQ
NVNLEKANVY NVLGQLVKSF TLNSNNTDNT INLSGLPKGV YYVYLINQDA ASAKKVIVE