| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1159 |
|---|
| Symbol | |
|---|
| ID | 5094162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1309334 |
|---|
| End bp | 1310677 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644740562 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001193511 |
|---|
| Protein GI | 146298920 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAG TTATCAAACT CTCTCAATTT TTATTGAGTT TATCTTTACT TATTATTCTT
CACGAATTAG GACATTTTAT TCCTGCTAAA TTATTTAAAA CGAGAGTTGA AAAATTTTAC
TTATTTTTTG ATGTTAAATA TTCGCTGTTA AAAAAGAAAA TCGGCGAAAC TGAATATGGT
ATCGGATGGT TACCGCTTGG AGGTTATGTA AAAATTTCTG GAATGATCGA TGAAAGTATG
GACAAAGAGC AAATGGCGCT TCCTCCGCAG CCGTGGGAAT TTCGTTCTAA ACCAGCTTGG
CAGCGTTTAA TTATTATGCT TGGCGGTGTT ACCGTAAATT TTATTCTTGC ATTTATCATT
TATATAGGAA TGGCATTTGC TTATGGCGAT ACGTATATTG CAAACTCTGA TTTAAAAGAT
GGTGTGGCAA TAGACAATCC TGCAATGCTT AAAGCCGGAT TTAAAACCGG AGACAAGATT
ATTTCTATTG ACGGAAAAAA AGTAGAGAAT TTTGACAGTG ATATGAATAT GAATATCATT
ATGGCAAAAC AAGTTCTTAT AGAAAGAAAC GGCGAACAGC AGACTATTAA AATGCCTACT
GATTTTGTCG ATCAGTTGTC TAAACATGAA AAAGGCTTAT TAGTTGGTAT TAGAATGCCA
TTTGTTGTGG GCAAAATTTC TGAAGAATCT GAGAATACTG CTCTAAAACC AAAAGATTTA
GTTGTAAGCC TGAACGGACA GAAAATTAAA TATTTTGATG AAGCTAAAGC TATCTTAGAA
AGCAATAAAG GAAAATCTAT TCCTGCAGTT GTTTTACGTG ATTTAAAAGA AACTCCTATT
ACCGTAAAAG TATCTAATGC AGGGAAACTT GGGGTTGCTG TGGGCGGTTT AGGAATGGAC
TCTTTAGAAA AATTAGGTTA CTATAAAGTA AGCACAAAAG AATATGGTTT CTTCGAATCG
ATTCCGGTTG GTCTTGAAAA AGGAAAAGAT CAGTTGGTAG GTTACGGAAA ACAATTAAAA
ATGATTTTTA ATCCAGAAAC AAAAGCTTAC AAACAAGTAG GTGGTTTTGC TGCGATTTAC
AATATTTTCC CTAGTTTTTG GAGCTGGGAA ACTTTCTGGT CAATTACGGC TTTATTATCA
ATTATGCTTG GAGTTATGAA TTTATTGCCA ATTCCGGCAC TTGATGGTGG TCATGTGATG
TTTTTATTAT ATGAAATGAT CAGCGGTAAA AAACCGAGCG ATAAATTCCT AGAGAACGCA
CAAATGGTTG GTTTTGTTTT ACTTATTTCA CTACTACTGT TTGCTAATGG TAACGACATT
TACAAGGCAA TTGTAGGCAA GTAA
|
|---|
| Protein sequence | MDIVIKLSQF LLSLSLLIIL HELGHFIPAK LFKTRVEKFY LFFDVKYSLL KKKIGETEYG
IGWLPLGGYV KISGMIDESM DKEQMALPPQ PWEFRSKPAW QRLIIMLGGV TVNFILAFII
YIGMAFAYGD TYIANSDLKD GVAIDNPAML KAGFKTGDKI ISIDGKKVEN FDSDMNMNII
MAKQVLIERN GEQQTIKMPT DFVDQLSKHE KGLLVGIRMP FVVGKISEES ENTALKPKDL
VVSLNGQKIK YFDEAKAILE SNKGKSIPAV VLRDLKETPI TVKVSNAGKL GVAVGGLGMD
SLEKLGYYKV STKEYGFFES IPVGLEKGKD QLVGYGKQLK MIFNPETKAY KQVGGFAAIY
NIFPSFWSWE TFWSITALLS IMLGVMNLLP IPALDGGHVM FLLYEMISGK KPSDKFLENA
QMVGFVLLIS LLLFANGNDI YKAIVGK
|
|---|
| |