Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1077 |
Symbol | |
ID | 5091807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1221275 |
End bp | 1222792 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644740477 |
Product | all-trans-retinol 13,14-reductase |
Protein accession | YP_001193429 |
Protein GI | 146298838 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC AATATGATGT AGTAATTGTT GGCAGTGGTT TAGGCGGCTT GGTTTCGTCT ATCATTTTGG CTAAGGAAGG CTACAGCGTT TGTGTACTCG AAAAAAACAA TCAATACGGA GGAAATCTCC AGACTTTTGT TCGCGATAAA ACTATTTTTG ATACCGGGAT TCACTATATC GGAGGTTTAG AAAAAGGACA AAATCTCTAT CAATATTTCA AATATCTCGG CATTATCGAT CATCTTAATT TAAAAAAATT AGATGAAGAC TGCTTCGATA TGATTTCTTT TGAAAACGAT CCAAACGAAT ATCCGCATGC ACAGGGTTAT GAAAATTTCG TAAATCAGCT TGCTGTTTTC TTTCCGGAGG AAAAAGAAAA TCTCTACAAC TACTGCGAAA AATTAAAAAC AGTCTGCGAT GCTTTTCCGC TGTACAATTT AAACTGGGAA GGAAAATACG ATCCTGAAAT TCTGGAACTT AATGCAAAAG AAACTATTAA TGCCTTTACA GAAAATGAAA AACTAAAAGC GGTGCTTGCC GGATCTAATT TCCTATATGC AGGAATTCCG GATAAATCGC CTTTTTATGT TCATGCACTT TCTGTTAATT CCTATATTCA AAGTTCGTGG CGCTGCATAA ACGGCGGCAG CCAGATTACG AAACAGCTTT TAAAACAACT CAAAAAGTAT GGCGGAGAAT TCTATAAGTA CAAAGAAGTT ACCCGTTTTA ATGTTGAAGA AAACAAAGTC GTTTCTGTAG ATTTAAAAAA CGGAACACAA GTTTCGGGTT CGATTTTTAT TTCGAATATT GAACCTAAAA CAACTTTAAA AATGGCGGGT TCAGAAAACT TTAGAAAAGC TTTTTTTAAC CGAATTCAGG ATCTCGAAGA TGTCATTTCG GCTTTTAGTT TGTATATCGT TTTTGAACCG GAAAGTTTTA AATACATCAA TCATAATTTT TATCATTTCA AAAAAAGTGA TGATGTCTGG ACGGCTCAGG AATATGATGA AAGTTCGTGG CCAAAAAGTT ATATGGCATC CATGAATGCT TCTAAAAAAG AAGAAATCTG GGCAGAAGGA ATGACTTTTT TAACGTACAT GAAATACAAA GATGTCGAAC CCTGGGCAGA TACTTTTAAT ACAACTGCAG AAGAAAATGA CCGCGGGGAA AGTTATGAGG ATTTCAAAAA CCGAAAAGCA GCTAAATTTC TGGAAGAAAT CGAAATCAAA TTTCCGGGAA TTAGAGATTG CATAAAATCA ATTCATACTT CTACTCCATT ATCGTATCGT GATTATATTG GCGGACATAA TGGAAATATG TACGGATATG TTAAAGATTC TAATAATCCG ATGAAAACAA TGATTCCGGT AAAAACTAAG CTGGAAAATC TGTATCTTAC GGGCCAAAGT ACTAACATGC ACGGGGTTCT GGGTGTTACC ATTGGAGCCG TAAATACCTG CTCTGAAATT GTTGGGAAAG AATATCTCTT AACTAAAATT AATACGGAAT CTGAATAG
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Protein sequence | MKKQYDVVIV GSGLGGLVSS IILAKEGYSV CVLEKNNQYG GNLQTFVRDK TIFDTGIHYI GGLEKGQNLY QYFKYLGIID HLNLKKLDED CFDMISFEND PNEYPHAQGY ENFVNQLAVF FPEEKENLYN YCEKLKTVCD AFPLYNLNWE GKYDPEILEL NAKETINAFT ENEKLKAVLA GSNFLYAGIP DKSPFYVHAL SVNSYIQSSW RCINGGSQIT KQLLKQLKKY GGEFYKYKEV TRFNVEENKV VSVDLKNGTQ VSGSIFISNI EPKTTLKMAG SENFRKAFFN RIQDLEDVIS AFSLYIVFEP ESFKYINHNF YHFKKSDDVW TAQEYDESSW PKSYMASMNA SKKEEIWAEG MTFLTYMKYK DVEPWADTFN TTAEENDRGE SYEDFKNRKA AKFLEEIEIK FPGIRDCIKS IHTSTPLSYR DYIGGHNGNM YGYVKDSNNP MKTMIPVKTK LENLYLTGQS TNMHGVLGVT IGAVNTCSEI VGKEYLLTKI NTESE
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