Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0828 |
Symbol | |
ID | 5092017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 938779 |
End bp | 940140 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644740228 |
Product | DNA repair protein RadA |
Protein accession | YP_001193181 |
Protein GI | 146298590 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG TTAAAACTTC CTTTTTTTGC CAAAATTGCG GCACCCAATA TTCTAAATGG CAGGGGCAGT GCAACGCGTG CAAGGAATGG AATACAATTG CTGAAGAAAT AATCCAGAAA CAAGAAAAAG TCGCCTGGAA AAGCGAGCCG ACTTCATCAA GTAAAGCACC AAGACCTTTA AAAATAACTG AAATTGATTC GGCGCAGGAA ATTCGTATGG ATACTACCGA CGGCGAATTG AATCGTGTTT TGGGAGGCGG AATTGTTCCG GGATCTTTAA CACTTTTAGG CGGCGAACCA GGAATTGGAA AAAGTACACT TTTACTTCAA ATCTCATTAA AATTACCTTA TAAAACCTTA TATGTTTCTG GCGAAGAAAG CCAGAAACAA ATAAAAATGC GTGCCGAAAG AATAACGCCA AACAGCGATA ACTGCTATAT TTTAACGGAA ACCAAAACGC AAAACATTTT TAAACAAATT GAAGCCATTC AGCCTGAAAT TGTAATCATC GATTCGATTC AGACTTTACA TACAGATTAT ATTGAATCTA CTGCCGGCAG TATTTCTCAA ATTAGAGAAA CCACTGCCGA ATTGATCAAA TTTGCTAAAG AAACCAATAT TCCGGTTATT TTAATTGGTC ATATTACTAA AGACGGAAAT ATCGCCGGAC CAAAAATTCT GGAACACATG GTTGACACCG TTCTTCAGTT TGAAGGCGAC AGAAACCATA TTTATCGAAT TCTGCGTTCG CTGAAAAATC GCTTTGGTTC AACCTCTGAA CTGGGAATTT ACGAAATGCT TGGAAGCGGT TTGCGAGAAG TCAGCAATCC GTCAGAAATA TTAATTTCAC ACAAAGACGA AGAATTATCA GGAACTGCAA TTGCCACAAC TCTTGAGGGA ATGCGCCCGC TGATGATCGA AATTCAGTCT TTGGTAAGTA CCGCTGTTTA TGGAACTCCT CAAAGAAGCA CAACAGGTTA CAATGCCAAA CGTCTAAACA TGATTTTGGC TGTTTTAGAA AAAAGAGCCG GATTCCGTTT GGGTGCAAAA GACGTTTTCT TAAATGTAAC CGGAGGAATT TCTGTAGATG ATCCTGCGAT TGATCTTGCA GTTGTTGCTG CAATTTTATC ATCAAATGAA GATATACCCG TTGGAAAAGG TTTTTGTTTT GCCGGTGAAG TTGGTCTTTC TGGAGAAATT CGTCCTGTAA ACCGTGTAGA CCAGCGCATT CAGGAAGCCG AAAAATTAGG CTTCGACACG ATCTTTGTTT CTAAATACAA TAAAATTGCT TTAAAAAATA CAGGAATCAA AGTTGAACTT GTAGCAAAAA TTGAAGATGT TGCCAGTATC CTTTTTGGTT GA
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Protein sequence | MSKVKTSFFC QNCGTQYSKW QGQCNACKEW NTIAEEIIQK QEKVAWKSEP TSSSKAPRPL KITEIDSAQE IRMDTTDGEL NRVLGGGIVP GSLTLLGGEP GIGKSTLLLQ ISLKLPYKTL YVSGEESQKQ IKMRAERITP NSDNCYILTE TKTQNIFKQI EAIQPEIVII DSIQTLHTDY IESTAGSISQ IRETTAELIK FAKETNIPVI LIGHITKDGN IAGPKILEHM VDTVLQFEGD RNHIYRILRS LKNRFGSTSE LGIYEMLGSG LREVSNPSEI LISHKDEELS GTAIATTLEG MRPLMIEIQS LVSTAVYGTP QRSTTGYNAK RLNMILAVLE KRAGFRLGAK DVFLNVTGGI SVDDPAIDLA VVAAILSSNE DIPVGKGFCF AGEVGLSGEI RPVNRVDQRI QEAEKLGFDT IFVSKYNKIA LKNTGIKVEL VAKIEDVASI LFG
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