Gene Fjoh_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0497 
Symbol 
ID5089810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp520570 
End bp521361 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content30% 
IMG OID644739896 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001192851 
Protein GI146298260 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.516029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAT ACTTAGAACA TTACGTAACT CAAAAAACTG AAAGGTTCAT CAATAAAATA 
TGGTGTCTGG ATAACAGCAT CGGCGAAAGC CTGATCGAAA ATAAACTCGT TTTACCTAAC
GGCTGTTTCA ATCTAGCGAT TGTAACTGGA AAAGCGATAG AAGTTCATAC GAGTAAAAAC
AAATATGAAA TGAACGAAGG TGTTTATTTT TGTTCACAAA TGACCAATAA AGTTTTGGTT
AATATTGAGC CGAAAACCAA AGTCACTATA ATTCAGTTTC ATACCTGGAC ACTTTCGATG
TTTCCAAAAT ACGATTTAAG CAATTTTACA GATTCAATTA TCAAAATTAA TCCTGAAGAA
CTGCCTTTTA ATCTTCAAAT TGATTCAGAC ATTGAACGTT TATTACAAAC AATAAATGTT
TATTTTGAAG AATTATCAGA TTTACATTCA GAGAAAAACA CAATCGAAAA AATCTGTGAG
ATCATTAAAA ATCAAGAAGA AATTTCGGTT GCAGACATCA GCAAGAATTT AAAATTATCC
CAAAGACTGC TTCAAATTAA ATTTAAAACA GCAACCGGAT TGACAATTAA AAAATACATT
CAGATTTTAA AATTCAGAAA AGCGGTCGAT CAAATGGTGA ATGCTGATTT AGAAAAGCTA
AAATTAACCG ATGTTGCGCT TTACAATAAA TACTTTGATC AGTCGCATTT TATAAAAAAA
TTCAAAGATG TGATGAAAAC TACACCGAAA ACATTCGATC CTGATTCGTA TTTTCTCTCA
CTTAAAAGAT AA
 
Protein sequence
MNLYLEHYVT QKTERFINKI WCLDNSIGES LIENKLVLPN GCFNLAIVTG KAIEVHTSKN 
KYEMNEGVYF CSQMTNKVLV NIEPKTKVTI IQFHTWTLSM FPKYDLSNFT DSIIKINPEE
LPFNLQIDSD IERLLQTINV YFEELSDLHS EKNTIEKICE IIKNQEEISV ADISKNLKLS
QRLLQIKFKT ATGLTIKKYI QILKFRKAVD QMVNADLEKL KLTDVALYNK YFDQSHFIKK
FKDVMKTTPK TFDPDSYFLS LKR