Gene Fjoh_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0474 
Symbol 
ID5089988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp494303 
End bp495043 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content34% 
IMG OID644739869 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001192829 
Protein GI146298238 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG TATTAATAAC AGGAGCAAAT AGAAGCATAG GATTAGAAAT AACAAAACAG 
CTTTCAAAAC AGGGATTGTT TGTGTATTTA GGAAGCCGCG ATCTTGAAAA AGGAAACGAA
ATTGTAAAAG AATTAAACAA AGATGGTTTT CAAAATATCA AAGCGATTCA AATTGATGTT
ACCAATCCGG ATTCAATTTT AGCAGCAAAA AAGATTGTAG AAAACGAGCA GGGAAAATTA
GATATCCTAA TCAACAATGC AGGAATAAGC GGCGGCCAGT TTCCTCAAAC TGCTTCAGAC
ACCAGTGTTA AAGACATTAA AAATGTATTT GAAACTAACT TTTTTGGTGT TATAAGCGTT
ACTCAGGCTT TTTTGGAATT ACTTAAAAAA TCAGACAGTC CGAGAATTAG TAATATAACT
TCCGGACTTG GTTCTTTAAC TCTGCATAGT GATGCATCAT GGAAATATTA CGATTTTAAA
TCAGCGGCTT ACGGAACTTC AAAAACAGCA TTAAATGCAT ATACCATTGT ACTGGCTTAT
GAACTAAAAG ATTTATCTTT TAAAGTAAAT GCAATTGATC CGGGTTACAC GGCAACAGAC
TTCAATCATT ATAGCGGTCC CGGAACTGTA GAAAGTGCAG CATCTTTTAT TATCAAACAT
ACATTAACTG ATGAAAACGG ACCAACGGGA CAATTTTTCA GTAATGATAT TGAAGATGAA
ACAGGGGTAA GTCCTTGGTA A
 
Protein sequence
MKSVLITGAN RSIGLEITKQ LSKQGLFVYL GSRDLEKGNE IVKELNKDGF QNIKAIQIDV 
TNPDSILAAK KIVENEQGKL DILINNAGIS GGQFPQTASD TSVKDIKNVF ETNFFGVISV
TQAFLELLKK SDSPRISNIT SGLGSLTLHS DASWKYYDFK SAAYGTSKTA LNAYTIVLAY
ELKDLSFKVN AIDPGYTATD FNHYSGPGTV ESAASFIIKH TLTDENGPTG QFFSNDIEDE
TGVSPW