Gene Fjoh_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0398 
SymbolrpsJ 
ID5093281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp407899 
End bp408204 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content33% 
IMG OID644739792 
Product30S ribosomal protein S10 
Protein accessionYP_001192753 
Protein GI146298162 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAA AAATCAGAAT AAAACTAAAA TCTTACGATC ACATGTTGGT AGATAAATCT 
GCTGAAAAGA TCGTAAAAAC AGTAAAAACT ACTGGAGCAG TTGTGACAGG TCCAATCCCG
TTGCCAACTC ACAAAAAACT TTTCACTGTA TTGCGTTCTC CGCACGTTAA CAAAAAAGCG
AGAGAGCAAT TTGAAGTAAT GTCATACAAG AGATTGATTG ATATTTATTC ATCTTCATCT
AAAACTATTG ATGCTTTAAT GAAACTTGAG TTACCAAGTG GTGTTGAAGT AGAGATTAAA
GTATAA
 
Protein sequence
MSQKIRIKLK SYDHMLVDKS AEKIVKTVKT TGAVVTGPIP LPTHKKLFTV LRSPHVNKKA 
REQFEVMSYK RLIDIYSSSS KTIDALMKLE LPSGVEVEIK V