Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0334 |
Symbol | |
ID | 5089535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 355120 |
End bp | 356253 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644739728 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001192689 |
Protein GI | 146298098 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.272347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAATT CAAGAATTTA TTTATCACTC TCAGCACAAA GTGGTTTTGA ACAAAAATAT GTTCAGAAAG CATTAGAAAC AAATTGGATA ACTTCCGGAG GGCCAAATGT TGATGATTTT GAAATTAAAC TTGAAAATTA TTTTAATAAA AAATCGTTTG TAACTGCATT AAATTCTGGA ACATCAGCTA TTCATTTGGC ATTGATTTTA TTAAATGTCA AAGCTGGCGA TGAAGTAATT TGTCAGAGCA TGACATTTTC GGCATCTGCT AATCCTATTT TGTATCAAGG TGCAGTGCCT GTTTTTGTTG ACAGTGAATC TGATACATGG AATATTTGCC CTGAGAATCT TGAAATAGCG ATAAAAGACA GAATAGCAAA AGGAAAAAAG CCTAAAGCAA TTATTGCTGT TCATTTATAT GGAATACCAT ATAAGGTTGA TGAGGTTCAT GCTATAGCAG ATAGATATGA AATACCAATT ATTGAAGATA GTGCAGAAGC TTTAGGGAGT ACATATAAAG GTAAAAAATG TGGAAGCTTT GGAAGCTTTG GAATTCTTTC TTTTAATGGC AATAAAATTA TTACAACTTC AAGTGGAGGT GCACTGATTA CAGATTCTAA AAAAATAAAA GATAAAGCCA TTTTTTATTC AAATCAATCA AAGGATATAG CTGTTCATTA TCAACATAGT GAAATTGGAT ATAATTATAG AATGAGTAAT ATTTGTGCAG GTATTGGTTT AGGACAAATA AAAATCTTGG ATAAGAATGT TGAAGCGCGG AGAAAAAATC ATTTTTTTTA CAAAGAGATT TTTAAAGAAA TAGAAAATGT AGAACTTTCA GAAGTATTAG ATGAAACTCA TTTTTCGAAT TTTTGGTTGA ACACAATTCT TATAAAGCCA AGTAATAATA TAAATAAGGA AGGTTTAAGA ACGGCATTGG AAAACGCAAA TATTGAAAGT CGTCCTCTTT GGAAACCAAT GCATTTACAG CCTATTTTTT GTAAATACCC CTACTATGGA GGTAAAATTG CGGAAGGTCT ATTTGATAAC GGATTGTGTT TACCATCAGG TTCAAATTTA ACAATTGAAG ATAAGGATAG AATTAGAAAA GTAATTGAAG AATTTTTTAA TTGA
|
Protein sequence | MDNSRIYLSL SAQSGFEQKY VQKALETNWI TSGGPNVDDF EIKLENYFNK KSFVTALNSG TSAIHLALIL LNVKAGDEVI CQSMTFSASA NPILYQGAVP VFVDSESDTW NICPENLEIA IKDRIAKGKK PKAIIAVHLY GIPYKVDEVH AIADRYEIPI IEDSAEALGS TYKGKKCGSF GSFGILSFNG NKIITTSSGG ALITDSKKIK DKAIFYSNQS KDIAVHYQHS EIGYNYRMSN ICAGIGLGQI KILDKNVEAR RKNHFFYKEI FKEIENVELS EVLDETHFSN FWLNTILIKP SNNINKEGLR TALENANIES RPLWKPMHLQ PIFCKYPYYG GKIAEGLFDN GLCLPSGSNL TIEDKDRIRK VIEEFFN
|
| |