Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0249 |
Symbol | |
ID | 5091304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 265251 |
End bp | 267317 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644739642 |
Product | TonB-dependent receptor |
Protein accession | YP_001192605 |
Protein GI | 146298014 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAATTACTCT TTTTGCAGTT TTGCTTTTGT CTCAGGTTTC TGTTTCTCAG GAAGTTAAAA AAGATAGTGT TTCAGCAAAC GAATTGTCAG AAGTTAAAGT TACTACTGCG ACAAGAACAG AAAGGGTACT TTCATCATTG CCTTTGCCAA TGACAATTAT TACATCTGAG GCAATTATAA AATCTGGAGT TACAAGATTA AATGAAATTT TAAGTGAGCA GACAGGAATT ATTTTGATTC CGGACGAAAG TGGTTTTGAG GGAATTCAAA TGCAGGGTTT AGATGCTGCT TATACTATGA TTTTAATTGA CGGTGTACCG CTTGTTGGAA GAAGCGCCGG TGTTTTGGAC CTTTCAAGAG TTTCGGTTGG AAATATAGAG AGAATTGAAA TTGTAAAAGG AGCTTCCTCA GCATTGTATG GTTCTGAAGC CATGGGAGGA GTAATAAATG TGATTACTAA AAAACCTAAA AAAGATATGT TTTCGGGTAG TCTTTCTTAT AGATATGCTA CATTTAATAC TAATGATGCA AATACAAATC TTCTTTGGAA GAAAAAGAAA TTTTCAGCAA ATCTTTTTGC AAATTTTTAT TCTACAGATG GATATGATTT AGATAAAAGT ACACCATTGA AAAATGTAGA GCCATTTTAC AATTTTACGA TTCAGCCGAA AATATATTAT GATTTCTCAG AAAACTTGAA ATTAATTGTA AGTAACCGTT TTTATGACAT GAAGATGGAT AATGTGGCGA TTATTGATTC TGAAAATTAT AAAGGAGATG CAAAAGAAAA AGAATGGAAC TCACAGGTTA AATTTGAACA TAAATGGAGT TCTAAATTAT ATTCTGAATA TGAATTCTAT ACTACTAATT ACAAAAATGA TTCGTTTTTA AATGATGCAA ATAATGTTCT TTATGAAAGT GCTTATTATA ATCAATGGCT TCTGCGTCCG GAGATTAGGA CTACGCTTTC AATAAAGAAT GATAAATTGA CAGGAGGTCT CGGATTAAAT TATGAGACTT TGGATAGGAC ATATTTTGAT AAAAAAGTAG AGTTTAATTC GCAATATTTC TTTTTGCAAT ATGATTGTAA TCCAACAGAA AGATGGAATA TAATCGCTGG ATTTAGATAT GATAATCATA GTGTATATGC TTCACAATTC AGTCCGAAAC TTGCGGTAAA TTTTAAGATT AATGAAAACT TTTCTTTAAA ATCTTCAGTA GGATATGGTT ATAAAGCACC AGATTTCCGC CAATTATATT TTGATTTTAC AAATCCTTCT GTTGGTTATA CTGTCTTAGG GTATAATGTA GCCGAAGCGC GATTAAATCA ACTTCAGGAG CAAGGGCAGA TTTTAAGCAG AGTAGATGGA GTTAACTTTA ACAATCCGTT AGAAGCCGAA AGTTCAATAA ATTTCAATTT TGGAACTTTT TATAAAAAGA ACAAGTTAAG ATTAGATGTT AATGCTTTTT ATAATTCAAT AGAAAATTTA ATTGATGCTC GTGTTGTAGC CCAAAAAACA AATGGTCAAA ATGTTTTCAG TTACTTTAAT ATAAGCCAGA TTTTTACTTA TGGTTTAGAG TTCAATTCAA CATACGACTT TACCAAACAA TTATCTGTAT CATTTGGATA TCAGTATCTA ACAGCAAAGG ATAAATCTGT GGTTGATAAT TTCGAGGATT ATCAATACAT ACGTAACTCA GATTTACAAA CTGTACAAAT TAAAAAGTCT GATTATTTTG GATTGTATAA TAGATCAAAA CATACTGCTA ACGTTAAAGT TGCATATTCT ATTCCAAAAA TTAAGACCGA TATTAATCTA CGAGTTTTTT ATAGAAGCAA ATATGGGATG TTTGATACTA ACGGAAATCA AATTTTGGAC AAATATGACA AATTTGTCAG TGATTACTTT ATAACCAACT TATCAATTTC AAAATATATC GGGGATAAAT TTATGCTTCA GGCAGGAGCC AATAATTTAC TTGATTTTAC AGACCCGAGT CAAATTAGTA ACCTGGCAGG AAGGCAGCTT TTTGCACGAA TTCAATATAA TTTTTAA
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Protein sequence | MKIKITLFAV LLLSQVSVSQ EVKKDSVSAN ELSEVKVTTA TRTERVLSSL PLPMTIITSE AIIKSGVTRL NEILSEQTGI ILIPDESGFE GIQMQGLDAA YTMILIDGVP LVGRSAGVLD LSRVSVGNIE RIEIVKGASS ALYGSEAMGG VINVITKKPK KDMFSGSLSY RYATFNTNDA NTNLLWKKKK FSANLFANFY STDGYDLDKS TPLKNVEPFY NFTIQPKIYY DFSENLKLIV SNRFYDMKMD NVAIIDSENY KGDAKEKEWN SQVKFEHKWS SKLYSEYEFY TTNYKNDSFL NDANNVLYES AYYNQWLLRP EIRTTLSIKN DKLTGGLGLN YETLDRTYFD KKVEFNSQYF FLQYDCNPTE RWNIIAGFRY DNHSVYASQF SPKLAVNFKI NENFSLKSSV GYGYKAPDFR QLYFDFTNPS VGYTVLGYNV AEARLNQLQE QGQILSRVDG VNFNNPLEAE SSINFNFGTF YKKNKLRLDV NAFYNSIENL IDARVVAQKT NGQNVFSYFN ISQIFTYGLE FNSTYDFTKQ LSVSFGYQYL TAKDKSVVDN FEDYQYIRNS DLQTVQIKKS DYFGLYNRSK HTANVKVAYS IPKIKTDINL RVFYRSKYGM FDTNGNQILD KYDKFVSDYF ITNLSISKYI GDKFMLQAGA NNLLDFTDPS QISNLAGRQL FARIQYNF
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