Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0236 |
Symbol | |
ID | 5091291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 247015 |
End bp | 247833 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739629 |
Product | pseudouridine synthase |
Protein accession | YP_001192592 |
Protein GI | 146298001 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA ATTTAAAACG TCTGAATAAA TTTATAGGTG AAACGGGTTA TTGTTCTCGT CGTGAAGCCG ATAAATTAAT TGAAGAAGGA CGCGTAACAA TAAATGGTGC AGCTGCTGAA ATGGGAACTA AAGTTTCATC AGATGATGAA ATACGCATTG ACGGTAAATT AATCGTTGAA AAACACGAAA AATTGGTTTA TCTGGCTTTT AATAAACCAG TAGGAATTGA ATGTACCACT AACTTAGAGG TTAAAAATAA TATTGTCGAT TATATTAATT ATCCTAAACG TATTTTCCCA ATTGGAAGGC TGGATAAAGC GAGTGAAGGA TTAATTTTTA TGACTAATGA CGGTGATATC GTAAACAAGA TTTTGCGTGC CAGAAACAAT CACGAAAAAG AATATACGGT TACAGTTAAC AAACCTATTA CAGAACGTTT TATTCAGCGT ATGGGTAATG GAGTTCCTAT TTTAGATACT GTCACAAAAA AATGTAAAGT AGAGCAAATC AGCAAATACA CTTTCAAGAT TATTTTAACG CAGGGATTAA ACCGTCAGAT TAGAAGAATG TCTGAGTATC TGGGTTATGA AGTTACTGCC TTAAAACGTA TTAGAATCAT TAATATCTCG CTGGATGTTC CGGTTGGGCG CTACCGTGAT TTAACTGATG CTGAAATTAA AGAATTAAAT AAATTAATAG AGCCTTCGAG TAAAACTGAA GAAGCGAGTC TTCCAAAGGC TGCAGCTCCA ACTCCAAGTC GAAGATCAAC GTTTATTTCT AAAAATGATC CTAGATTTAG AAAAAGAGGC AACAATTAA
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Protein sequence | MEENLKRLNK FIGETGYCSR READKLIEEG RVTINGAAAE MGTKVSSDDE IRIDGKLIVE KHEKLVYLAF NKPVGIECTT NLEVKNNIVD YINYPKRIFP IGRLDKASEG LIFMTNDGDI VNKILRARNN HEKEYTVTVN KPITERFIQR MGNGVPILDT VTKKCKVEQI SKYTFKIILT QGLNRQIRRM SEYLGYEVTA LKRIRIINIS LDVPVGRYRD LTDAEIKELN KLIEPSSKTE EASLPKAAAP TPSRRSTFIS KNDPRFRKRG NN
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