Gene Fjoh_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0214 
Symbol 
ID5094542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp225847 
End bp226926 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content34% 
IMG OID644739607 
ProductDNA replication and repair protein RecF 
Protein accessionYP_001192570 
Protein GI146297979 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.613838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTAA ACAAACTTTC TTTATTCAAT TATAAAAATT TCTCTGAAGC CGGTTTTGAT 
TTCGACATCA AGATCAACTG CTTTGTAGGC AAAAACGGAA TTGGAAAAAC CAATGTTCTG
GATGCAATTT ATCATTTAGC TTACGGAAAA AGTTATTTTA ATCCGCTTGC CGTGCAAAAC
ATCAAACACG GAGAAGAGTT TTTTGTAATT GATGCCGAAT TAGAAAAAAA TGACAGAACA
GAGCAAATTG TCTGCAGTTT AAAAAAAGGG CAAAAAAAGG TTTTAAAAAG AAACGGAAAA
GCATACGATA AATTTTCTGA TCATATCGGA TTCATTCCGC TTGTAATTAT TTCACCAGCC
GACCGCGATT TAATTGTGGA AGGAAGCGAA ACACGCCGTA AATTTATGGA CAGCGTTATT
TCGCAGTTAG ATTCAACGTA TCTGCATCAG CTTATTCAAT ATCAAAAAGT AATTGTACAG
CGAAATGCCC TTTTAAAATA TTTTGCTCTT AACCACACTT TCGACAACGA CACCTTATCT
ATATATAATG AGCAGTTAAA TGAATTTGGA AAATCGATTT TTGAAAAAAG AAAAGAGTTT
CTCGAAGAAT TCATACCTAT ATTTAATGTA CACCATCAGG CCATAACAGG CTCAGAAGAA
TCAGTGCAAT TGGTTTACGA AAGTCATTTG TTTGAAAAAG ATTTATTAAC GCTTTTACAG
GAAAACATAA ATAAGGACAG AGCGTTGCAT TATACAAGCT CAGGGATCCA TAAAGATGAT
TTGTCTTTTG AAATTGATTC GCATCCTATA AAAAAATTCG GATCACAGGG ACAGCAAAAA
TCGTTTTTGA TTGCCTTGAA ACTGGCTCAG TTTGAATTTT TGAAAAAACA AAGCGGTGTA
AAACCTATTT TATTATTTGA TGATATTTTT GACAAACTGG ATGAAACCCG CGTTGCTAAA
ATTGTCGAAA TGGTGAACAG CGAAACTTTT GGACAGCTCT TTATTTCAGA TACACATCCG
GAACGAACCG AAGCGATTGT AAAATCGACA CACCAAACGT ATAAGATATT CAATTTATAA
 
Protein sequence
MHLNKLSLFN YKNFSEAGFD FDIKINCFVG KNGIGKTNVL DAIYHLAYGK SYFNPLAVQN 
IKHGEEFFVI DAELEKNDRT EQIVCSLKKG QKKVLKRNGK AYDKFSDHIG FIPLVIISPA
DRDLIVEGSE TRRKFMDSVI SQLDSTYLHQ LIQYQKVIVQ RNALLKYFAL NHTFDNDTLS
IYNEQLNEFG KSIFEKRKEF LEEFIPIFNV HHQAITGSEE SVQLVYESHL FEKDLLTLLQ
ENINKDRALH YTSSGIHKDD LSFEIDSHPI KKFGSQGQQK SFLIALKLAQ FEFLKKQSGV
KPILLFDDIF DKLDETRVAK IVEMVNSETF GQLFISDTHP ERTEAIVKST HQTYKIFNL