Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0182 |
Symbol | |
ID | 5094510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 187206 |
End bp | 187778 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739574 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001192538 |
Protein GI | 146297947 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.659923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTA AATTATACCA AAACCGAACT TTTGACACAG TAGATTACTC TGATCAAAGT TTATCGAATA CAGAATTTGT AAACTGCGAG TTCATCAACT GCAATTTCTC TAAAAGTGAT TTGAGTCATA ATGATTTTTT AGATTCTACT TTTAAAAACT GTAATCTTTC GCTGGCTGTG CTTAAGAATA CCGGATTAAA AAACATTAAG TTTATTGGCT GTAAACTAAT GGGATTGGAT TTTAGTGCAA GTAACAGTTT TTTGTTTTCG ATGAGTTTTC AGGATTGTCT TTTAGACTAT TCTACTTTTA TTTATAAAAA ACTAAAGAAA ACCAATTTTA TTGACTGTTC GCTGAAAGAT GTCGATTTCT CAAATACCGA TTTGTCTTTG GCAGCTTTCA AAAATTGTGA TTTATCTAAT GCTACTTTCG CGGAATGCAT CCTGGAGAAA ACCGATTTCA GGTCTTCGAG AAATTATGCT TTCGATCCTT CTGAAAATAA AATTAAAGGG ACAAAAGTTT CTCATACAGC GCTTGCCGGA TTATTAGAAA AATTTGATTT GGATATTGAA TAG
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Protein sequence | METKLYQNRT FDTVDYSDQS LSNTEFVNCE FINCNFSKSD LSHNDFLDST FKNCNLSLAV LKNTGLKNIK FIGCKLMGLD FSASNSFLFS MSFQDCLLDY STFIYKKLKK TNFIDCSLKD VDFSNTDLSL AAFKNCDLSN ATFAECILEK TDFRSSRNYA FDPSENKIKG TKVSHTALAG LLEKFDLDIE
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