| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0153 |
|---|
| Symbol | |
|---|
| ID | 5094482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 159638 |
|---|
| End bp | 160678 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644739546 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001192510 |
|---|
| Protein GI | 146297919 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.178304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACATT CACATCAAAA AGTATTGGTT ACCGGCGGAA CTGGTTTTGT GGCAATTCAC
AGTATTTTGC AATTACTAAA TCGCGGTTAT CAGGTTCGAA CAACCGTAAG ATCTTTAAAT
AGCAGAGATA AAATATTTGA AATGCTGAAA AATGGCGGTA TTACAGATTT CAGCCAATTA
GAATTTATTG AAACCGATTT AACTTCCGAT AAAAACTGGA ACGAAGCCAT GATGGGCTGT
CAATATGTGT TACATATTGC TTCGCCTATA TTTTTGAGAC TTCCAAAAAA TGAAGACGAA
ATGATACGCC CTGCTGTCGA CGGTACGCTT AGAGTTTTAA AGGCAGCGAG AGACTCTGGT
GTAAAACGTG TTGTTATGAC TTCAAATTTT GGCGCTGTAG GCTACAGCCA CAAAGACAAA
AATTCTCTTA TTACCGAAGA AAGCTGGACA GACCCAAACG AAAAAGGACT TTCGACCTAC
AATAAATCAA AAGTACTGGC CGAAAAAGCA GCCTGGGATT TTATTGAAAA AAAAGGAGGC
GCTCTTGAAC TTTCTGTAAT TAACCCAATG GGAATTTTTG GACCATCTTT AAACGAAGAT
TTATCAAGCG GTTTTGAGTT ACTTAAAAAA TTATTAGACG GTTCAATGAA AGCAATTCCA
GATATTAGAT TAGGAATTGT CGATGTAAGA GATGTTGCCG AACTGCACAT TCTAGCAATG
GAAAAACCGC AGGCAAAAGG CGAGCGTTTT TTAGCTTTAT CCGGAGGAAC AATGTCTTTA
ATGGAAATTG TAAAACTGCT GAAAGAAAAA ATGCCGTATG TAACAACAAA GGCACCAGCA
AAATCTTTAC CTACCTTTAT AATACGCTTA TCATCAATAT TTAACGATCA GGCAAAAGCA
ATTTTACCTT TGGTTGGAAT TAATCGAAAT GCCAGCAATA AAAAAGCAAA AACAATATTA
GGCTGGGTAC CGCGCACCAA TGAAGAAGCT GTAACAGCTA GTGTAATAAG TCTCATAAAA
TGGAAAAATC TTAATATCTA A
|
|---|
| Protein sequence | MIHSHQKVLV TGGTGFVAIH SILQLLNRGY QVRTTVRSLN SRDKIFEMLK NGGITDFSQL
EFIETDLTSD KNWNEAMMGC QYVLHIASPI FLRLPKNEDE MIRPAVDGTL RVLKAARDSG
VKRVVMTSNF GAVGYSHKDK NSLITEESWT DPNEKGLSTY NKSKVLAEKA AWDFIEKKGG
ALELSVINPM GIFGPSLNED LSSGFELLKK LLDGSMKAIP DIRLGIVDVR DVAELHILAM
EKPQAKGERF LALSGGTMSL MEIVKLLKEK MPYVTTKAPA KSLPTFIIRL SSIFNDQAKA
ILPLVGINRN ASNKKAKTIL GWVPRTNEEA VTASVISLIK WKNLNI
|
|---|
| |