Gene Fjoh_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0087 
Symbol 
ID5090854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp90927 
End bp92606 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content36% 
IMG OID644739479 
Productnicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001192444 
Protein GI146297853 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase
[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATT TAGACGATAT ATTAAAATCA CGCCGCGATA CCCGACATTT TACTACCGAT 
GAGGTTCCTG ATGAAGTCAT TCAAAAAGCT TTACAGGCCG GACATTGGGC GCCATCTGTT
GGACTGACCG ATGCGACACG TTATTATATC ATTAAATCGG ATGCTGTTAA AAGTGCGATT
AAAAACCTGT TTTTAGATTA TAATAAAAAA GCGGAAGAAC TTACTGACAA TCCGGAACAG
AAAGAACTTT ACAAATCGCT AAAGCTGGAA GCAATAGAAG AAGCGCCAAT TGGACTTATA
ATTGCTTACG ATCGCTCAGT TTTAAATCAG TTTACGATTG GAACCATTGG CAGTAATGAG
GCTGTGAAGT TCAGTTCGGT TTGTGCAGCC CAGAATATTT GGCTTTCACT AACAGAACAA
GGTTACGGAA TGGGCTGGGT TTCAATTTTA AATTATTTCC AATTCAAAAA AATTCTTGAT
TTACCCGAAA ATATAGAACC GCTTGGTTAT TTCTGCATTG GAAAACCTGC CACAAATTAC
GGCAATCAGC CCATGTTACA GCAATTACAC TGGAAACAAA AATCTGAAAC TGCAGATTGT
AAGGAAATCA ATGAAATTCA TCAAATCAAT ATTTCTGATT TCGATTTAAA AAAAGAAACC
AAAGCAGATC CTAAAACTGA TTTCGCTGCA CTTTTACAAG AAAAAATAGA TTCAAAAACA
AAACCTCTTG GTTCACTGGG GACATTAGAA ACTTTGGCTT TTCAAATGGC ATCCGTTTTT
GAAACTTTAA ATCCGAAAAT TATAAACCCT AATGTTGTTG TTTTTGCAGC TGATCACGGA
ATTGCCAATC ACGGCGTAAG TGATTATCCG CAAGATGTAA CGCGCCAAAT GGTGAATAAT
TTTCTAAATG GCGGTGCTGC AATAAATGTT TTCTGCAAGC AGAATAATAT CGAATTATCG
ATTGTAGATT CGGGCGTAAA TTATGATTTC CCAACAAATG CTAAATTAAT TAATGCCAAA
ATAGCCAAAG GCACACAATC TTTTCTTTAC GCTTCGGCAA TGAGCGAAAC TGAACTTCAA
TTGTGTTTTG AAAAAGGAAA ATCTATTGTA GAAAATATTG CCAAAACGGG TTCTAACTGT
ATTGGTTTTG GTGAAATGGG AATTGGAAAT ACTTCTACAG CTTCTGTTTT AATGAGTCTT
TTAACGGGTT TGCCTATAGA AGAATGCGTT GGAAAAGGAA CGGGAATTAA TGACCAAAAA
CTGCTCGACA AACAAAATAT TCTAAAAAAA GCATTGGAAA ATTATTCCGG TCAAACCGAA
TTAAAACAGC ATCTTGCTTA TTTTGGAGGT TTTGAAATTA TGCAGATGGC AGGCGGCATG
TTGACAGCTT TTGAAAACAA AATGCTGATT CTTGTTGATG GTTTTATTTG CAGTGTGGCT
TTTTTAATTG CTTTTAAAAT AAATCCCAAC ATAAAACAAA ATGCCATTTT TTGTCATTGT
TCTGCCGAAA AAGCACATTT AAAACTGCTG GAATATCTTG ATGCAAAGCC CATTTTAAAT
TTAGATCTGC GCCTGGGAGA AGGAACCGGC TGTGCAGTTG CTTTTCCTAT TTTAAAATCG
GCAGAAGCTT TTTTGAATGA AATGGCTAGT TTTGAAAGCG TGGGAATAAG TAAGAAATAA
 
Protein sequence
MSHLDDILKS RRDTRHFTTD EVPDEVIQKA LQAGHWAPSV GLTDATRYYI IKSDAVKSAI 
KNLFLDYNKK AEELTDNPEQ KELYKSLKLE AIEEAPIGLI IAYDRSVLNQ FTIGTIGSNE
AVKFSSVCAA QNIWLSLTEQ GYGMGWVSIL NYFQFKKILD LPENIEPLGY FCIGKPATNY
GNQPMLQQLH WKQKSETADC KEINEIHQIN ISDFDLKKET KADPKTDFAA LLQEKIDSKT
KPLGSLGTLE TLAFQMASVF ETLNPKIINP NVVVFAADHG IANHGVSDYP QDVTRQMVNN
FLNGGAAINV FCKQNNIELS IVDSGVNYDF PTNAKLINAK IAKGTQSFLY ASAMSETELQ
LCFEKGKSIV ENIAKTGSNC IGFGEMGIGN TSTASVLMSL LTGLPIEECV GKGTGINDQK
LLDKQNILKK ALENYSGQTE LKQHLAYFGG FEIMQMAGGM LTAFENKMLI LVDGFICSVA
FLIAFKINPN IKQNAIFCHC SAEKAHLKLL EYLDAKPILN LDLRLGEGTG CAVAFPILKS
AEAFLNEMAS FESVGISKK