Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0087 |
Symbol | |
ID | 5090854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 90927 |
End bp | 92606 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644739479 |
Product | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001192444 |
Protein GI | 146297853 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCATT TAGACGATAT ATTAAAATCA CGCCGCGATA CCCGACATTT TACTACCGAT GAGGTTCCTG ATGAAGTCAT TCAAAAAGCT TTACAGGCCG GACATTGGGC GCCATCTGTT GGACTGACCG ATGCGACACG TTATTATATC ATTAAATCGG ATGCTGTTAA AAGTGCGATT AAAAACCTGT TTTTAGATTA TAATAAAAAA GCGGAAGAAC TTACTGACAA TCCGGAACAG AAAGAACTTT ACAAATCGCT AAAGCTGGAA GCAATAGAAG AAGCGCCAAT TGGACTTATA ATTGCTTACG ATCGCTCAGT TTTAAATCAG TTTACGATTG GAACCATTGG CAGTAATGAG GCTGTGAAGT TCAGTTCGGT TTGTGCAGCC CAGAATATTT GGCTTTCACT AACAGAACAA GGTTACGGAA TGGGCTGGGT TTCAATTTTA AATTATTTCC AATTCAAAAA AATTCTTGAT TTACCCGAAA ATATAGAACC GCTTGGTTAT TTCTGCATTG GAAAACCTGC CACAAATTAC GGCAATCAGC CCATGTTACA GCAATTACAC TGGAAACAAA AATCTGAAAC TGCAGATTGT AAGGAAATCA ATGAAATTCA TCAAATCAAT ATTTCTGATT TCGATTTAAA AAAAGAAACC AAAGCAGATC CTAAAACTGA TTTCGCTGCA CTTTTACAAG AAAAAATAGA TTCAAAAACA AAACCTCTTG GTTCACTGGG GACATTAGAA ACTTTGGCTT TTCAAATGGC ATCCGTTTTT GAAACTTTAA ATCCGAAAAT TATAAACCCT AATGTTGTTG TTTTTGCAGC TGATCACGGA ATTGCCAATC ACGGCGTAAG TGATTATCCG CAAGATGTAA CGCGCCAAAT GGTGAATAAT TTTCTAAATG GCGGTGCTGC AATAAATGTT TTCTGCAAGC AGAATAATAT CGAATTATCG ATTGTAGATT CGGGCGTAAA TTATGATTTC CCAACAAATG CTAAATTAAT TAATGCCAAA ATAGCCAAAG GCACACAATC TTTTCTTTAC GCTTCGGCAA TGAGCGAAAC TGAACTTCAA TTGTGTTTTG AAAAAGGAAA ATCTATTGTA GAAAATATTG CCAAAACGGG TTCTAACTGT ATTGGTTTTG GTGAAATGGG AATTGGAAAT ACTTCTACAG CTTCTGTTTT AATGAGTCTT TTAACGGGTT TGCCTATAGA AGAATGCGTT GGAAAAGGAA CGGGAATTAA TGACCAAAAA CTGCTCGACA AACAAAATAT TCTAAAAAAA GCATTGGAAA ATTATTCCGG TCAAACCGAA TTAAAACAGC ATCTTGCTTA TTTTGGAGGT TTTGAAATTA TGCAGATGGC AGGCGGCATG TTGACAGCTT TTGAAAACAA AATGCTGATT CTTGTTGATG GTTTTATTTG CAGTGTGGCT TTTTTAATTG CTTTTAAAAT AAATCCCAAC ATAAAACAAA ATGCCATTTT TTGTCATTGT TCTGCCGAAA AAGCACATTT AAAACTGCTG GAATATCTTG ATGCAAAGCC CATTTTAAAT TTAGATCTGC GCCTGGGAGA AGGAACCGGC TGTGCAGTTG CTTTTCCTAT TTTAAAATCG GCAGAAGCTT TTTTGAATGA AATGGCTAGT TTTGAAAGCG TGGGAATAAG TAAGAAATAA
|
Protein sequence | MSHLDDILKS RRDTRHFTTD EVPDEVIQKA LQAGHWAPSV GLTDATRYYI IKSDAVKSAI KNLFLDYNKK AEELTDNPEQ KELYKSLKLE AIEEAPIGLI IAYDRSVLNQ FTIGTIGSNE AVKFSSVCAA QNIWLSLTEQ GYGMGWVSIL NYFQFKKILD LPENIEPLGY FCIGKPATNY GNQPMLQQLH WKQKSETADC KEINEIHQIN ISDFDLKKET KADPKTDFAA LLQEKIDSKT KPLGSLGTLE TLAFQMASVF ETLNPKIINP NVVVFAADHG IANHGVSDYP QDVTRQMVNN FLNGGAAINV FCKQNNIELS IVDSGVNYDF PTNAKLINAK IAKGTQSFLY ASAMSETELQ LCFEKGKSIV ENIAKTGSNC IGFGEMGIGN TSTASVLMSL LTGLPIEECV GKGTGINDQK LLDKQNILKK ALENYSGQTE LKQHLAYFGG FEIMQMAGGM LTAFENKMLI LVDGFICSVA FLIAFKINPN IKQNAIFCHC SAEKAHLKLL EYLDAKPILN LDLRLGEGTG CAVAFPILKS AEAFLNEMAS FESVGISKK
|
| |