Gene Fjoh_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0080 
Symbol 
ID5090847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp85828 
End bp86604 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content35% 
IMG OID644739472 
ProductABC transporter related 
Protein accessionYP_001192437 
Protein GI146297846 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.871899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAATA TTCTATCAGC TTCAAACTTA ACTATTGGAT ATAAATCCAA GAAAGCAACT 
GTGATTATTG CTGAGAATTT GAATTTAAAT TTAAAGTCAG GAAAACTAAT CTCTTTAATT
GGTGCAAATG GAATTGGGAA ATCGACTTTA CTGCGCACGA TTACCGGAAT TCAGCATCCG
TTATCTGGAA ATGTTTATTT GAATGATACA GCTGTTTCTG CTTATAAACC TTTGGATTTA
GCGCAGAATT TAAGTTTGGT TTTAACTGAA AAACTGCCGC CGAGTAATCT TTCGGTTTTC
GAATTAGTGG CGCTTGGCAG ACAGCCTTAT ACCAATTGGG TTGGAACTTT GACCCAAACT
GATATCGAAA AAGTTCAGGA AGCGATGGAG TTGACTCAAA TAGAACATCT TTCTCATAAA
AAACATTACG AAATAAGCGA CGGACAATTG CAAAAGGTTT TAATCGCACG TGCTTTGGCA
CAAAATACAC CGCTCATTAT TCTGGACGAA CCAACAACAC ATTTAGATTT ACTGCACAAA
GTTTCATTAT TTAAATTGCT GAAGAAACTA ACTCAGGAAA CTCAAAAATG TATTTTATTT
TCTACACACG ATATTGATCT GGCAATTCAA TTAAGCGATG AAATGATTGT CATGACTCCT
GAAAATGTTG TACAGGACGA ACCTTGTAAT TTGATTTCAA ACGGAAGTTT TGCAGCTTTG
TTCAAAGATG AACATATAAT TTTTGATGCC GAAAAAGGAA AGTTTATTGT GACTTAA
 
Protein sequence
MRNILSASNL TIGYKSKKAT VIIAENLNLN LKSGKLISLI GANGIGKSTL LRTITGIQHP 
LSGNVYLNDT AVSAYKPLDL AQNLSLVLTE KLPPSNLSVF ELVALGRQPY TNWVGTLTQT
DIEKVQEAME LTQIEHLSHK KHYEISDGQL QKVLIARALA QNTPLIILDE PTTHLDLLHK
VSLFKLLKKL TQETQKCILF STHDIDLAIQ LSDEMIVMTP ENVVQDEPCN LISNGSFAAL
FKDEHIIFDA EKGKFIVT