Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0072 |
Symbol | |
ID | 5090839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 75921 |
End bp | 77897 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644739464 |
Product | hypothetical protein |
Protein accession | YP_001192429 |
Protein GI | 146297838 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.447332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAGC ACAAAATAGA AGATATTTTT TCATCAATGG AAAACTTTTC GAGTGTTCCG CCTCCTGAAT TATGGAGTCA GATTGAAGAA AAACTAGACA AGCCTAAAAA GAAGAAGAGA GTTATTCTTT GGTGGTCGGC TGCTGCATGC TTATTATTAG GCTTAATGCT TCCGTCTGTT TTACATTTTT CTTCTAGTGA TAAACAGACA AACCCAATTC AAAATAACAC TTTAGAAAAC AACAACATTG TACTTGATCA GAAAGAAAAC AATACCGAAA AGACAAATAA AAATACTGAA CGTTCTATAG AAAACGACAT CAATAATCAA TCAAAAAACA ACAATCAAAT TTCATCATCA GAAGAAACAA TAAATCAATC CAAAAATCAA TTAAACAAAA CACAGCAAAC AGAAACAGTT GACTCCGATT CTGAAAAAAA ATTGAATACC AATTCATTTG CACCAAAATC AAACGGGACA AAAAATAGTT TAAATAATAA TGCAACTGTA GCTGAAAAAT CATTAACACC TGTAAAAGAA AACAAATTCA ATCTGGATTC TAAAAATCAG TTTTCGGGCA GTAAAAATGG TCAGTCTAAC CAGACTGTTG CAGAAAAAAC CTATGTTCCT GCTAAAGAAA ATGTATTTAA TGCGGCTTCT ACAAACCAAT TTTCTGGTAA TAAAACCGGA AAAACAAATC AGGCTTTAGC CGAAAAAACA TACGCTCCTG CTAAAGAGAA TGCATTTAAT CCGGCTTCTA CCAACCAATT TTCTGGTAAT AAAACCGGGA AAACAAATCA GGCTTTAGCC GAAAAAACAT TTAGTCCTAA TCAGGCTGAT CGTTTAAATT CGGCATCAAA AAGTCAGTTA TCAGACATTG AAAAAAGAAA CGCAGATAAG GTTCTTGCGG AGAAAACATT TAATGCAGGA AAACAGAATA AATTTAATGC AGGTCAGAAA AATCAAATCT CTAATTCAAT TTTTGAAAAT ATTCCAAATT CAAAAAACAA CAATACTATT GCGTTTACAG GTTCAAATTC TGGTTTAAAT GGAAATCAAA ATGCTGTAAA TTCTAATAAA GAAAAACAAA ACATTCAAAA AACATCAACT GATAAAAGCA TTGCAAGTCT TCAAAAAGAC AATTCGAAAG GAAATACTGC TTTTACAAAC GTGAATGTTT TAACTAAAAA AGATTCTGCA CAGCTGGCTG AACTTCAAAA TCTGGAAAAA GGAATTGTAA CTCCAGAAGA AGAGAAAAAG AAAAAAGAAG ACAAACTGCT TTCTAAAGCT GATAAATGGG CTTTACAAGT TTTTGCCGGA GTTGCAAATT CTGAAAACTA CAGCAAAAAC AAAACTTTAG GAAACGTAAA CGATTCTAAA CAAAGTAATT CATACGGTGT AAAAACACAG TATAAAATCA ATAAAAAATG GGCCGTTGCT TCTGGATTTA AGATTAATGA GCTTGGGCAG AGTGTTGCCA ATGTTTCGTA TTACAATGCC AAAAACAGTG CTCTTTTTAC ACCGGTTGAT TATTTTGCTC AAAGTGCAGG TCCAACACAA TTTACCAGTG ATGCTAATTA TGTACTGGTT TCAAATAATG CAAAAGAAGC CATAAACAGC AGTAATATTC AAACTGGTAA TTTAGACCAG AATTTACGAT ATCTGGAAAT GCCTTTGGAG GTTTCGTATT CGATTTTTAA CAGAAAGAAA ACTAGCATCA ATTTAAATAC CGGGGCTTTT GTTGGTAAAT TAATTTCGAA TAATGTGGCT TTAGACGGTA CTTCTATTGG CGAAAATATA AACGCAAATG ATTACGTGTA TGGTTCTACA TTAAGCAGTA CGATTCAGTA TCGCGTTTAC AAGAAAACAA ATGTCTTTGT AGAGCCGGCT GTAAATTATT ATGCAAATCC TTTAAACAGC CAGTCTTTCA ATCAGTTTCA ATGGGGATTA AATTTTGGTT TGAATGTTAA CTTTTAA
|
Protein sequence | MKKHKIEDIF SSMENFSSVP PPELWSQIEE KLDKPKKKKR VILWWSAAAC LLLGLMLPSV LHFSSSDKQT NPIQNNTLEN NNIVLDQKEN NTEKTNKNTE RSIENDINNQ SKNNNQISSS EETINQSKNQ LNKTQQTETV DSDSEKKLNT NSFAPKSNGT KNSLNNNATV AEKSLTPVKE NKFNLDSKNQ FSGSKNGQSN QTVAEKTYVP AKENVFNAAS TNQFSGNKTG KTNQALAEKT YAPAKENAFN PASTNQFSGN KTGKTNQALA EKTFSPNQAD RLNSASKSQL SDIEKRNADK VLAEKTFNAG KQNKFNAGQK NQISNSIFEN IPNSKNNNTI AFTGSNSGLN GNQNAVNSNK EKQNIQKTST DKSIASLQKD NSKGNTAFTN VNVLTKKDSA QLAELQNLEK GIVTPEEEKK KKEDKLLSKA DKWALQVFAG VANSENYSKN KTLGNVNDSK QSNSYGVKTQ YKINKKWAVA SGFKINELGQ SVANVSYYNA KNSALFTPVD YFAQSAGPTQ FTSDANYVLV SNNAKEAINS SNIQTGNLDQ NLRYLEMPLE VSYSIFNRKK TSINLNTGAF VGKLISNNVA LDGTSIGENI NANDYVYGST LSSTIQYRVY KKTNVFVEPA VNYYANPLNS QSFNQFQWGL NFGLNVNF
|
| |