Gene Fjoh_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0056 
Symbol 
ID5091038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp61310 
End bp62209 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content31% 
IMG OID644739448 
ProductMerR family transcriptional regulator 
Protein accessionYP_001192413 
Protein GI146297822 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACA ATATAAAAAC TGTTTTCAGT ATAAAAGATC TTGAGAATTT ATCCGGAATT 
AAAGCACACA CAATTCGTAT TTGGGAAAAG AGATACAACA TTCTTGAACC AATGCGTACC
GATACTAATA TCAGGCTTTA TAACCTGCAG AATTTACAGA AACTTTTAAA TATTACTTTA
TTACACGAAT ACGGTTATAA AATTTCTAAA ATCGCAACTT ATCCCGAGGA AAAAATCCCT
CAATTAGTCC GCGAAATCAT ATCAAAGAAA AACTCTCAAA ATTATGCCAT CACGTCTTTT
AAAATGGCGA TGATGAATTT TGACCAGGAA TTATTTTTCA ACACTTTTGA CTGGCTTATT
TCTGAGAAAA CATTCAAAGA AGTTTTTAAG GAGCATTTTT TACCTTTATT AAAAGAATTA
GGATTGTTAT GGCAGTCTGA AACCATAACT CCTGCAAATG AACATTTTAT GAGTCATTTG
ATCAAACAGA AAATCTTAAT TTATACCGAA AGCCTTCAGA TTCAGAAACC AACAAAAACC
GACAGAATTT TTGTGCTTTC TCTTCCGTTA AATGAAATTC ACCAAATTGG CTTACTATAT
CTTCAATATG AAATTTTATC AAAAGGATAC AAAACTATTT ATTTAGGCGA AAGCATGCCT
ATTGAAAACT TACAGGATTT AACCAAACAT TTTGAAAACA TCACTTTTGT TTCTTTCATG
ACTATACAGC CGGATCGAAG TGTTATTAAT CAATATGTAA AATCGATGGG ACAAAAACTA
CTTCAAAAAA ACAATGAAGT ATGGCTTATG GGCAAAATGG TTGAACATAT CGACAGAAAA
AATTTACCCG AAAGAATCCG AATTTTCGAT TCTATGGAAG AAACAATGGA AACAATTTAA
 
Protein sequence
MINNIKTVFS IKDLENLSGI KAHTIRIWEK RYNILEPMRT DTNIRLYNLQ NLQKLLNITL 
LHEYGYKISK IATYPEEKIP QLVREIISKK NSQNYAITSF KMAMMNFDQE LFFNTFDWLI
SEKTFKEVFK EHFLPLLKEL GLLWQSETIT PANEHFMSHL IKQKILIYTE SLQIQKPTKT
DRIFVLSLPL NEIHQIGLLY LQYEILSKGY KTIYLGESMP IENLQDLTKH FENITFVSFM
TIQPDRSVIN QYVKSMGQKL LQKNNEVWLM GKMVEHIDRK NLPERIRIFD SMEETMETI