Gene Fjoh_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0049 
Symbol 
ID5091031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp55185 
End bp56138 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content37% 
IMG OID644739437 
Producttransketolase, central region 
Protein accessionYP_001192406 
Protein GI146297815 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3958] Transketolase, C-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ACGAAAATAC AGGAAGTAAA GATACTCGTT CTGGTTTTGG AGCGGGAATG 
ACTGAACTAG GTCAAAAAAA TGAAAATGTT GTAGCATTAT GTGCTGACTT AATTGGATCA
TTAAAATTTG ATGATTTCAA AAAAAATCAC CCAGAGCGTT TTTTCCAAAT TGGAATTGCT
GAAGCAAATA TGATTGGAAT CGCTGCAGGT TTAACAATTG GAGGGAAAAT TCCATTTACT
GGAACTTTTG CTAACTTCTC TACAGGAAGA GTTTACGACC AAATCCGTCA ATCTGTTGCT
TATTCAGATA AAAATGTAAA AATCTGTGCT TCTCACGCTG GTTTAACGCT GGGAGAAGAT
GGTGCAACTC ACCAAATTTT AGAAGATATC GGATTAATGA AAATGCTTCC TGGAATGACA
GTAATCAATA CTTGCGATTA CAACCAGACT AAAGCTGCTA CAATTGCATT AGCAGACCAC
CACGGACCGG CTTATTTACG TTTCGGACGT CCAGTTGTAG CGAACTTTAC TCCGGCTGAC
GAACCATTCG TAATTGGAAA AGCAATTTTA TTAAACGAAG GAACAGATGT TACGATTATC
GCAACAGGAC ACTTAGTTTG GGAAGCTCTT ATTGCTGCTG AAGCTTTAGA AGCAAAAGGA
ATTTCTGCAG AAGTAATCAA CATTCACACT ATTAAACCTC TTGATGAAGA AGCAATTCTT
AAATCGGTTG CTAAAACAAG ATGTGTAGTA ACTGCAGAAG AGCACAACTA CCTAGGAGGT
CTTGGAGAAA GCGTTTCAGG CGTATTAGCT TTAAACAATC CAACTCCACA AGAATTTGTT
GCTGTAAAAG ACAGTTTTGG TGAATCTGGA ACTCCTGAGC AGTTAATGGA AAAATACAAA
TTAAACAATC AAGCGATTGT TGAAGCTGTA GAAAAAGTTA TCAAAAGAAA GTAA
 
Protein sequence
MKKYENTGSK DTRSGFGAGM TELGQKNENV VALCADLIGS LKFDDFKKNH PERFFQIGIA 
EANMIGIAAG LTIGGKIPFT GTFANFSTGR VYDQIRQSVA YSDKNVKICA SHAGLTLGED
GATHQILEDI GLMKMLPGMT VINTCDYNQT KAATIALADH HGPAYLRFGR PVVANFTPAD
EPFVIGKAIL LNEGTDVTII ATGHLVWEAL IAAEALEAKG ISAEVINIHT IKPLDEEAIL
KSVAKTRCVV TAEEHNYLGG LGESVSGVLA LNNPTPQEFV AVKDSFGESG TPEQLMEKYK
LNNQAIVEAV EKVIKRK