| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0023 |
|---|
| Symbol | |
|---|
| ID | 5091005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 22159 |
|---|
| End bp | 23778 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644739406 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_001192380 |
|---|
| Protein GI | 146297789 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA GTATTTTACT GTTGGCACTT TTTGTTATCA CAAGTTTGAG TGCACAACAA
CGTCCTAAAT TAGTTGTGGG TATAGTTGTC GATCAAATGA AAATGGAATA TTTATATCGA
TTTTCTGATG ATTTTTCTCC AAACGGCTTT AAGAAATTAA TGAATGATGG ATTTACTTTC
CAGAATATGC ATTACAATTA TATGCCAACT TACACTGCCC CTGGACATGC TTCAATTTAT
ACTGGTACAA CACCAGCTAT TCATGGAATT GTTGGTAATG AATGGTTCAG CAGAACTCTT
GGAAAAGAAA TGTATTGTAC CGATGATGCA GGAGTTAAAA CTGTAGGTGA CGGTACAGCA
GAAGAAGGTG CAATGTCTCC TAAAAATCTT CAAAGTACAA CAATTACAGA TGAAGTTAGA
ATGGCTACTA ATTTTAATGG AAAAGTAATT GGAATGAGCT TAAAAGATCG TGGAGCTATA
TTACCGGCTG GTCATTTTGC TAATTGGGCA TTTTGGTATA GTAAAACTGG TTCATTTATT
TCTAGTACTT TTTATGGCGA TAAACTGCCT GATTGGGTTA CTGAATTCAA TAATGAAAAA
AACTACTTAA AATACATTAA TAAGGGATGG GATTTGTACA AACCTGCTTC GGTTTACAAT
GAAAGTCTTC CTGATAATAA TCCTTATGAA GGAAAATTAT ATGGAAGTGC TGCACCAGTT
TTTCCATATG ATTTAAAATC AATGTATGAG AAAAATGATG CTGGAGTTAT CCGTGCTACT
CCTTTTGGAA ATGATTTGCT GGCTGAATTT GCTAAAAGAG CAATCGAGAA GGAAGAATTA
GGAAAAGATA ATATTACAGA CTTCCTTACT GTTAGTTTCT CTTCTACAGA TTACGTTGGC
CATTTGCTTG GACCAAGATC AATGGAACTT CAAGATACTT ATTTGAGATT GGATCAAACA
ATTGCTGACT TTTTAGCTTA TCTTGATAAA ACGGTTGGTA AAGGGAATTA TTTACTTTTC
TTAACAGCAG ATCATGCAGG TGCAGAAAAT GTAATTTATT TAAAGGATCG CAAGTATAAT
GTTGATAATT ACCCTTCAAA AGAAGTTAAG AAAACTCTTC AGGATTTTTC TGTAAAAACT
TTTGGGGTGG ATTTGATCCA GAATTATTCA AACTTTAATG TTTTCTTCAA TAAACAAATT
ATTAAAGAAA AAGGATTAGA ACTTTTAAAA GTAAAGCAAG CTTTTAAAGA GTTTTTAATT
ACACAGCCAC AAGTTAAAAA AGTGTATACA GAAGAAGAAG TTTTAGCTAA TACTGGGAAT
GATTATGCTC TTAATTTTGT TGCAAAAGGC TATGATGTTA CACAAAATGG TGATTTAGTA
ATTGTTGATA AACCAGGTAT GATAGAATAT ACTCCAACAG GAACCTCACA CGGAACAATT
TACAGTTATG ATACCCATGT TCCGGCTATT TTCTATGGCT GGAATATTAA GAAAGGCGAG
TCTTACGATA AAAAAGCCAT TACGGAAATT GCTCCAACGA TAGCTCAAAA GATTAAAGTT
ACTTTCCCAA ATGGAACTGA AGCAAAAGTT ATGACTGAAG TTTTAGATAA TAAGAAATAA
|
|---|
| Protein sequence | MKKSILLLAL FVITSLSAQQ RPKLVVGIVV DQMKMEYLYR FSDDFSPNGF KKLMNDGFTF
QNMHYNYMPT YTAPGHASIY TGTTPAIHGI VGNEWFSRTL GKEMYCTDDA GVKTVGDGTA
EEGAMSPKNL QSTTITDEVR MATNFNGKVI GMSLKDRGAI LPAGHFANWA FWYSKTGSFI
SSTFYGDKLP DWVTEFNNEK NYLKYINKGW DLYKPASVYN ESLPDNNPYE GKLYGSAAPV
FPYDLKSMYE KNDAGVIRAT PFGNDLLAEF AKRAIEKEEL GKDNITDFLT VSFSSTDYVG
HLLGPRSMEL QDTYLRLDQT IADFLAYLDK TVGKGNYLLF LTADHAGAEN VIYLKDRKYN
VDNYPSKEVK KTLQDFSVKT FGVDLIQNYS NFNVFFNKQI IKEKGLELLK VKQAFKEFLI
TQPQVKKVYT EEEVLANTGN DYALNFVAKG YDVTQNGDLV IVDKPGMIEY TPTGTSHGTI
YSYDTHVPAI FYGWNIKKGE SYDKKAITEI APTIAQKIKV TFPNGTEAKV MTEVLDNKK
|
|---|
| |